Gene : Medtr2g103550 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  5699 Name:  ? Medtr2g103550
Secondary Identifier:  ? PAC:31066443
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g103550 0.5kb upstream 0.5kb upstream 3590 true chr2: 44580161-44583750 Medicago truncatula
Medtr2g103550 0.5kb upstream 0.5kb upstream 500 false chr2: 44583251-44583750 Medicago truncatula
Medtr2g103550 0.5kb downstream 0.5kb downstream 3590 true chr2: 44579661-44583250 Medicago truncatula
Medtr2g103550 0.5kb downstream 0.5kb downstream 500 false chr2: 44579661-44580160 Medicago truncatula
Medtr2g103550 1.0kb upstream 1.0kb upstream 4090 true chr2: 44580161-44584250 Medicago truncatula
Medtr2g103550 1.0kb upstream 1.0kb upstream 1000 false chr2: 44583251-44584250 Medicago truncatula
Medtr2g103550 1.0kb downstream 1.0kb downstream 4090 true chr2: 44579161-44583250 Medicago truncatula
Medtr2g103550 1.0kb downstream 1.0kb downstream 1000 false chr2: 44579161-44580160 Medicago truncatula
Medtr2g103550 2.0kb upstream 2.0kb upstream 5090 true chr2: 44580161-44585250 Medicago truncatula
Medtr2g103550 2.0kb upstream 2.0kb upstream 2000 false chr2: 44583251-44585250 Medicago truncatula
Medtr2g103550 2.0kb downstream 2.0kb downstream 5090 true chr2: 44578161-44583250 Medicago truncatula
Medtr2g103550 2.0kb downstream 2.0kb downstream 2000 false chr2: 44578161-44580160 Medicago truncatula
Medtr2g103550 5.0kb upstream 5.0kb upstream 8090 true chr2: 44580161-44588250 Medicago truncatula
Medtr2g103550 5.0kb upstream 5.0kb upstream 5000 false chr2: 44583251-44588250 Medicago truncatula
Medtr2g103550 5.0kb downstream 5.0kb downstream 8090 true chr2: 44575161-44583250 Medicago truncatula
Medtr2g103550 5.0kb downstream 5.0kb downstream 5000 false chr2: 44575161-44580160 Medicago truncatula
Medtr2g103550 10.0kb upstream 10.0kb upstream 13090 true chr2: 44580161-44593250 Medicago truncatula
Medtr2g103550 10.0kb upstream 10.0kb upstream 10000 false chr2: 44583251-44593250 Medicago truncatula
Medtr2g103550 10.0kb downstream 10.0kb downstream 13090 true chr2: 44570161-44583250 Medicago truncatula
Medtr2g103550 10.0kb downstream 10.0kb downstream 10000 false chr2: 44570161-44580160 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311793 5265 Fabidae View MSA
124063725 5270 Rosid View MSA
123743446 5271 Pentapetalae View MSA
122788248 5272 Eudicot View MSA
122047755 5273 Angiosperm View MSA
121310787 5274 Embryophyte View MSA
123348188 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.449        
cufflinks 1.448        
cufflinks 1.951        
cufflinks 1.21        
cufflinks 2.379       High
cufflinks 0.427       Low
cufflinks 1.769        
cufflinks 1.585        
cufflinks 1.343        

0 Strain