Gene : Medtr2g104100 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.2.2.23 - DNA-formamidopyrimidine glycosylase / Formamidopyrimidine-DNA glycosylase Description:  formamidopyrimidine-DNA glycosylase
Genomic Order:  5742 Name:  ? Medtr2g104100
Secondary Identifier:  ? PAC:31063095
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g104100 0.5kb upstream 0.5kb upstream 7094 true chr2: 44847474-44854567 Medicago truncatula
Medtr2g104100 0.5kb upstream 0.5kb upstream 500 false chr2: 44854068-44854567 Medicago truncatula
Medtr2g104100 0.5kb downstream 0.5kb downstream 7094 true chr2: 44846974-44854067 Medicago truncatula
Medtr2g104100 0.5kb downstream 0.5kb downstream 500 false chr2: 44846974-44847473 Medicago truncatula
Medtr2g104100 1.0kb upstream 1.0kb upstream 7594 true chr2: 44847474-44855067 Medicago truncatula
Medtr2g104100 1.0kb upstream 1.0kb upstream 1000 false chr2: 44854068-44855067 Medicago truncatula
Medtr2g104100 1.0kb downstream 1.0kb downstream 7594 true chr2: 44846474-44854067 Medicago truncatula
Medtr2g104100 1.0kb downstream 1.0kb downstream 1000 false chr2: 44846474-44847473 Medicago truncatula
Medtr2g104100 2.0kb upstream 2.0kb upstream 8594 true chr2: 44847474-44856067 Medicago truncatula
Medtr2g104100 2.0kb upstream 2.0kb upstream 2000 false chr2: 44854068-44856067 Medicago truncatula
Medtr2g104100 2.0kb downstream 2.0kb downstream 8594 true chr2: 44845474-44854067 Medicago truncatula
Medtr2g104100 2.0kb downstream 2.0kb downstream 2000 false chr2: 44845474-44847473 Medicago truncatula
Medtr2g104100 5.0kb upstream 5.0kb upstream 11594 true chr2: 44847474-44859067 Medicago truncatula
Medtr2g104100 5.0kb upstream 5.0kb upstream 5000 false chr2: 44854068-44859067 Medicago truncatula
Medtr2g104100 5.0kb downstream 5.0kb downstream 11594 true chr2: 44842474-44854067 Medicago truncatula
Medtr2g104100 5.0kb downstream 5.0kb downstream 5000 false chr2: 44842474-44847473 Medicago truncatula
Medtr2g104100 10.0kb upstream 10.0kb upstream 16594 true chr2: 44847474-44864067 Medicago truncatula
Medtr2g104100 10.0kb upstream 10.0kb upstream 10000 false chr2: 44854068-44864067 Medicago truncatula
Medtr2g104100 10.0kb downstream 10.0kb downstream 16594 true chr2: 44837474-44854067 Medicago truncatula
Medtr2g104100 10.0kb downstream 10.0kb downstream 10000 false chr2: 44837474-44847473 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300031 5265 Fabidae View MSA
124069357 5270 Rosid View MSA
123741491 5271 Pentapetalae View MSA
122770061 5272 Eudicot View MSA
122048986 5273 Angiosperm View MSA
121348452 5274 Embryophyte View MSA
123427632 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.328        
cufflinks 0.281        
cufflinks 0.13       Low
cufflinks 0.181        
cufflinks 0.148        
cufflinks 0.267        
cufflinks 0.307        
cufflinks 0.146       Low
cufflinks 0.515       High

0 Strain