Gene : Medtr2g105410 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10621:SF9 - F12F1.16 PROTEIN-RELATED Description:  DNA repair protein RAD23-1, putative
Genomic Order:  5834 Name:  ? Medtr2g105410
Secondary Identifier:  ? PAC:31066175
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g105410 0.5kb upstream 0.5kb upstream 5580 true chr2: 45445798-45451377 Medicago truncatula
Medtr2g105410 0.5kb upstream 0.5kb upstream 500 false chr2: 45450878-45451377 Medicago truncatula
Medtr2g105410 0.5kb downstream 0.5kb downstream 5580 true chr2: 45445298-45450877 Medicago truncatula
Medtr2g105410 0.5kb downstream 0.5kb downstream 500 false chr2: 45445298-45445797 Medicago truncatula
Medtr2g105410 1.0kb upstream 1.0kb upstream 6080 true chr2: 45445798-45451877 Medicago truncatula
Medtr2g105410 1.0kb upstream 1.0kb upstream 1000 false chr2: 45450878-45451877 Medicago truncatula
Medtr2g105410 1.0kb downstream 1.0kb downstream 6080 true chr2: 45444798-45450877 Medicago truncatula
Medtr2g105410 1.0kb downstream 1.0kb downstream 1000 false chr2: 45444798-45445797 Medicago truncatula
Medtr2g105410 2.0kb upstream 2.0kb upstream 7080 true chr2: 45445798-45452877 Medicago truncatula
Medtr2g105410 2.0kb upstream 2.0kb upstream 2000 false chr2: 45450878-45452877 Medicago truncatula
Medtr2g105410 2.0kb downstream 2.0kb downstream 7080 true chr2: 45443798-45450877 Medicago truncatula
Medtr2g105410 2.0kb downstream 2.0kb downstream 2000 false chr2: 45443798-45445797 Medicago truncatula
Medtr2g105410 5.0kb upstream 5.0kb upstream 10080 true chr2: 45445798-45455877 Medicago truncatula
Medtr2g105410 5.0kb upstream 5.0kb upstream 5000 false chr2: 45450878-45455877 Medicago truncatula
Medtr2g105410 5.0kb downstream 5.0kb downstream 10080 true chr2: 45440798-45450877 Medicago truncatula
Medtr2g105410 5.0kb downstream 5.0kb downstream 5000 false chr2: 45440798-45445797 Medicago truncatula
Medtr2g105410 10.0kb upstream 10.0kb upstream 15080 true chr2: 45445798-45460877 Medicago truncatula
Medtr2g105410 10.0kb upstream 10.0kb upstream 10000 false chr2: 45450878-45460877 Medicago truncatula
Medtr2g105410 10.0kb downstream 10.0kb downstream 15080 true chr2: 45435798-45450877 Medicago truncatula
Medtr2g105410 10.0kb downstream 10.0kb downstream 10000 false chr2: 45435798-45445797 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312076 5265 Fabidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.394        
cufflinks 2.6        
cufflinks 2.503        
cufflinks 3.863        
cufflinks 3.113        
cufflinks 2.652        
cufflinks 3.584        
cufflinks 2.227       Low
cufflinks 5.145       High

0 Strain