Gene : Medtr2g105390 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR16517:SF27 - TUBBY-LIKE PROTEIN 8 Description:  tubby-like protein
Genomic Order:  5833 Name:  ? Medtr2g105390
Secondary Identifier:  ? PAC:31064529
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g105390 0.5kb upstream 0.5kb upstream 2459 true chr2: 45440125-45442583 Medicago truncatula
Medtr2g105390 0.5kb upstream 0.5kb upstream 500 false chr2: 45442084-45442583 Medicago truncatula
Medtr2g105390 0.5kb downstream 0.5kb downstream 2459 true chr2: 45439625-45442083 Medicago truncatula
Medtr2g105390 0.5kb downstream 0.5kb downstream 500 false chr2: 45439625-45440124 Medicago truncatula
Medtr2g105390 1.0kb upstream 1.0kb upstream 2959 true chr2: 45440125-45443083 Medicago truncatula
Medtr2g105390 1.0kb upstream 1.0kb upstream 1000 false chr2: 45442084-45443083 Medicago truncatula
Medtr2g105390 1.0kb downstream 1.0kb downstream 2959 true chr2: 45439125-45442083 Medicago truncatula
Medtr2g105390 1.0kb downstream 1.0kb downstream 1000 false chr2: 45439125-45440124 Medicago truncatula
Medtr2g105390 2.0kb upstream 2.0kb upstream 3959 true chr2: 45440125-45444083 Medicago truncatula
Medtr2g105390 2.0kb upstream 2.0kb upstream 2000 false chr2: 45442084-45444083 Medicago truncatula
Medtr2g105390 2.0kb downstream 2.0kb downstream 3959 true chr2: 45438125-45442083 Medicago truncatula
Medtr2g105390 2.0kb downstream 2.0kb downstream 2000 false chr2: 45438125-45440124 Medicago truncatula
Medtr2g105390 5.0kb upstream 5.0kb upstream 6959 true chr2: 45440125-45447083 Medicago truncatula
Medtr2g105390 5.0kb upstream 5.0kb upstream 5000 false chr2: 45442084-45447083 Medicago truncatula
Medtr2g105390 5.0kb downstream 5.0kb downstream 6959 true chr2: 45435125-45442083 Medicago truncatula
Medtr2g105390 5.0kb downstream 5.0kb downstream 5000 false chr2: 45435125-45440124 Medicago truncatula
Medtr2g105390 10.0kb upstream 10.0kb upstream 11959 true chr2: 45440125-45452083 Medicago truncatula
Medtr2g105390 10.0kb upstream 10.0kb upstream 10000 false chr2: 45442084-45452083 Medicago truncatula
Medtr2g105390 10.0kb downstream 10.0kb downstream 11959 true chr2: 45430125-45442083 Medicago truncatula
Medtr2g105390 10.0kb downstream 10.0kb downstream 10000 false chr2: 45430125-45440124 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304088 5265 Fabidae View MSA
124063219 5270 Rosid View MSA
123740290 5271 Pentapetalae View MSA
122793260 5272 Eudicot View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.213        
cufflinks 0.201        
cufflinks 0.048     Low  
cufflinks 0.165        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.238        
cufflinks 0.175        
cufflinks 0.718       High

0 Strain