Gene : Medtr2g105290 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11945//PTHR11945:SF164 - MADS BOX PROTEIN Description:  agamous-like MADS-box protein AGL62
Genomic Order:  5826 Name:  ? Medtr2g105290
Secondary Identifier:  ? PAC:31062139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g105290 0.5kb upstream 0.5kb upstream 1031 true chr2: 45393890-45394920 Medicago truncatula
Medtr2g105290 0.5kb upstream 0.5kb upstream 500 false chr2: 45394421-45394920 Medicago truncatula
Medtr2g105290 0.5kb downstream 0.5kb downstream 1031 true chr2: 45393390-45394420 Medicago truncatula
Medtr2g105290 0.5kb downstream 0.5kb downstream 500 false chr2: 45393390-45393889 Medicago truncatula
Medtr2g105290 1.0kb upstream 1.0kb upstream 1531 true chr2: 45393890-45395420 Medicago truncatula
Medtr2g105290 1.0kb upstream 1.0kb upstream 1000 false chr2: 45394421-45395420 Medicago truncatula
Medtr2g105290 1.0kb downstream 1.0kb downstream 1531 true chr2: 45392890-45394420 Medicago truncatula
Medtr2g105290 1.0kb downstream 1.0kb downstream 1000 false chr2: 45392890-45393889 Medicago truncatula
Medtr2g105290 2.0kb upstream 2.0kb upstream 2531 true chr2: 45393890-45396420 Medicago truncatula
Medtr2g105290 2.0kb upstream 2.0kb upstream 2000 false chr2: 45394421-45396420 Medicago truncatula
Medtr2g105290 2.0kb downstream 2.0kb downstream 2531 true chr2: 45391890-45394420 Medicago truncatula
Medtr2g105290 2.0kb downstream 2.0kb downstream 2000 false chr2: 45391890-45393889 Medicago truncatula
Medtr2g105290 5.0kb upstream 5.0kb upstream 5531 true chr2: 45393890-45399420 Medicago truncatula
Medtr2g105290 5.0kb upstream 5.0kb upstream 5000 false chr2: 45394421-45399420 Medicago truncatula
Medtr2g105290 5.0kb downstream 5.0kb downstream 5531 true chr2: 45388890-45394420 Medicago truncatula
Medtr2g105290 5.0kb downstream 5.0kb downstream 5000 false chr2: 45388890-45393889 Medicago truncatula
Medtr2g105290 10.0kb upstream 10.0kb upstream 10531 true chr2: 45393890-45404420 Medicago truncatula
Medtr2g105290 10.0kb upstream 10.0kb upstream 10000 false chr2: 45394421-45404420 Medicago truncatula
Medtr2g105290 10.0kb downstream 10.0kb downstream 10531 true chr2: 45383890-45394420 Medicago truncatula
Medtr2g105290 10.0kb downstream 10.0kb downstream 10000 false chr2: 45383890-45393889 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311915 5265 Fabidae View MSA
124073225 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain