Gene : Medtr2g436300 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Description:  glyoxysomal fatty acid beta-oxidation MFP-A protein
Genomic Order:  1952 Name:  ? Medtr2g436300
Secondary Identifier:  ? PAC:31063699
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11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ILEUDEG-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5136 Medicago truncatula pathologic  
Mtruncatula PWY-5137 Medicago truncatula pathologic  
Mtruncatula PWY-5138 Medicago truncatula pathologic  
Mtruncatula PWY-561 Medicago truncatula pathologic  
Mtruncatula PWY-6435 Medicago truncatula pathologic  
Mtruncatula PWY-6837 Medicago truncatula pathologic  
Mtruncatula PWY-7036 Medicago truncatula pathologic  
Mtruncatula PWY-735 Medicago truncatula pathologic  
Mtruncatula PWY-7606 Medicago truncatula pathologic  
Mtruncatula VALDEG-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g436300 0.5kb upstream 0.5kb upstream 9829 true chr2: 14109267-14119095 Medicago truncatula
Medtr2g436300 0.5kb upstream 0.5kb upstream 500 false chr2: 14109267-14109766 Medicago truncatula
Medtr2g436300 0.5kb downstream 0.5kb downstream 9829 true chr2: 14109767-14119595 Medicago truncatula
Medtr2g436300 0.5kb downstream 0.5kb downstream 500 false chr2: 14119096-14119595 Medicago truncatula
Medtr2g436300 1.0kb upstream 1.0kb upstream 10329 true chr2: 14108767-14119095 Medicago truncatula
Medtr2g436300 1.0kb upstream 1.0kb upstream 1000 false chr2: 14108767-14109766 Medicago truncatula
Medtr2g436300 1.0kb downstream 1.0kb downstream 10329 true chr2: 14109767-14120095 Medicago truncatula
Medtr2g436300 1.0kb downstream 1.0kb downstream 1000 false chr2: 14119096-14120095 Medicago truncatula
Medtr2g436300 2.0kb upstream 2.0kb upstream 11329 true chr2: 14107767-14119095 Medicago truncatula
Medtr2g436300 2.0kb upstream 2.0kb upstream 2000 false chr2: 14107767-14109766 Medicago truncatula
Medtr2g436300 2.0kb downstream 2.0kb downstream 11329 true chr2: 14109767-14121095 Medicago truncatula
Medtr2g436300 2.0kb downstream 2.0kb downstream 2000 false chr2: 14119096-14121095 Medicago truncatula
Medtr2g436300 5.0kb upstream 5.0kb upstream 14329 true chr2: 14104767-14119095 Medicago truncatula
Medtr2g436300 5.0kb upstream 5.0kb upstream 5000 false chr2: 14104767-14109766 Medicago truncatula
Medtr2g436300 5.0kb downstream 5.0kb downstream 14329 true chr2: 14109767-14124095 Medicago truncatula
Medtr2g436300 5.0kb downstream 5.0kb downstream 5000 false chr2: 14119096-14124095 Medicago truncatula
Medtr2g436300 10.0kb upstream 10.0kb upstream 19329 true chr2: 14099767-14119095 Medicago truncatula
Medtr2g436300 10.0kb upstream 10.0kb upstream 10000 false chr2: 14099767-14109766 Medicago truncatula
Medtr2g436300 10.0kb downstream 10.0kb downstream 19329 true chr2: 14109767-14129095 Medicago truncatula
Medtr2g436300 10.0kb downstream 10.0kb downstream 10000 false chr2: 14119096-14129095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295897 5265 Fabidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.101     High High
cufflinks 8.273        
cufflinks 9.005        
cufflinks 3.517       Low
cufflinks 8.957        
cufflinks 2.713       Low
cufflinks 7.713        
cufflinks 8.271        
cufflinks 8.918        

0 Strain