Gene : Medtr2g436760 M. truncatula Mt4.0v1
Defline:  (1 of 2) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Description:  isoleucine-tRNA ligase
Genomic Order:  1987 Name:  ? Medtr2g436760
Secondary Identifier:  ? PAC:31067969
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g436760 0.5kb upstream 0.5kb upstream 12789 true chr2: 14336324-14349112 Medicago truncatula
Medtr2g436760 0.5kb upstream 0.5kb upstream 500 false chr2: 14336324-14336823 Medicago truncatula
Medtr2g436760 0.5kb downstream 0.5kb downstream 12789 true chr2: 14336824-14349612 Medicago truncatula
Medtr2g436760 0.5kb downstream 0.5kb downstream 500 false chr2: 14349113-14349612 Medicago truncatula
Medtr2g436760 1.0kb upstream 1.0kb upstream 13289 true chr2: 14335824-14349112 Medicago truncatula
Medtr2g436760 1.0kb upstream 1.0kb upstream 1000 false chr2: 14335824-14336823 Medicago truncatula
Medtr2g436760 1.0kb downstream 1.0kb downstream 13289 true chr2: 14336824-14350112 Medicago truncatula
Medtr2g436760 1.0kb downstream 1.0kb downstream 1000 false chr2: 14349113-14350112 Medicago truncatula
Medtr2g436760 2.0kb upstream 2.0kb upstream 14289 true chr2: 14334824-14349112 Medicago truncatula
Medtr2g436760 2.0kb upstream 2.0kb upstream 2000 false chr2: 14334824-14336823 Medicago truncatula
Medtr2g436760 2.0kb downstream 2.0kb downstream 14289 true chr2: 14336824-14351112 Medicago truncatula
Medtr2g436760 2.0kb downstream 2.0kb downstream 2000 false chr2: 14349113-14351112 Medicago truncatula
Medtr2g436760 5.0kb upstream 5.0kb upstream 17289 true chr2: 14331824-14349112 Medicago truncatula
Medtr2g436760 5.0kb upstream 5.0kb upstream 5000 false chr2: 14331824-14336823 Medicago truncatula
Medtr2g436760 5.0kb downstream 5.0kb downstream 17289 true chr2: 14336824-14354112 Medicago truncatula
Medtr2g436760 5.0kb downstream 5.0kb downstream 5000 false chr2: 14349113-14354112 Medicago truncatula
Medtr2g436760 10.0kb upstream 10.0kb upstream 22289 true chr2: 14326824-14349112 Medicago truncatula
Medtr2g436760 10.0kb upstream 10.0kb upstream 10000 false chr2: 14326824-14336823 Medicago truncatula
Medtr2g436760 10.0kb downstream 10.0kb downstream 22289 true chr2: 14336824-14359112 Medicago truncatula
Medtr2g436760 10.0kb downstream 10.0kb downstream 10000 false chr2: 14349113-14359112 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308695 5265 Fabidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.225        
cufflinks 14.147     High High
cufflinks 9.431        
cufflinks 0.217       Low
cufflinks 13.434     High  
cufflinks 0.09     Low Low
cufflinks 1.014        
cufflinks 15.282     High High
cufflinks 0.932        

0 Strain