Gene : Medtr2g436560 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF09320 - Domain of unknown function (DUF1977) (DUF1977) Description:  chaperone DnaJ-domain protein
Genomic Order:  1972 Name:  ? Medtr2g436560
Secondary Identifier:  ? PAC:31066984
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g436560 0.5kb upstream 0.5kb upstream 1770 true chr2: 14227342-14229111 Medicago truncatula
Medtr2g436560 0.5kb upstream 0.5kb upstream 500 false chr2: 14228612-14229111 Medicago truncatula
Medtr2g436560 0.5kb downstream 0.5kb downstream 1770 true chr2: 14226842-14228611 Medicago truncatula
Medtr2g436560 0.5kb downstream 0.5kb downstream 500 false chr2: 14226842-14227341 Medicago truncatula
Medtr2g436560 1.0kb upstream 1.0kb upstream 2270 true chr2: 14227342-14229611 Medicago truncatula
Medtr2g436560 1.0kb upstream 1.0kb upstream 1000 false chr2: 14228612-14229611 Medicago truncatula
Medtr2g436560 1.0kb downstream 1.0kb downstream 2270 true chr2: 14226342-14228611 Medicago truncatula
Medtr2g436560 1.0kb downstream 1.0kb downstream 1000 false chr2: 14226342-14227341 Medicago truncatula
Medtr2g436560 2.0kb upstream 2.0kb upstream 3270 true chr2: 14227342-14230611 Medicago truncatula
Medtr2g436560 2.0kb upstream 2.0kb upstream 2000 false chr2: 14228612-14230611 Medicago truncatula
Medtr2g436560 2.0kb downstream 2.0kb downstream 3270 true chr2: 14225342-14228611 Medicago truncatula
Medtr2g436560 2.0kb downstream 2.0kb downstream 2000 false chr2: 14225342-14227341 Medicago truncatula
Medtr2g436560 5.0kb upstream 5.0kb upstream 6270 true chr2: 14227342-14233611 Medicago truncatula
Medtr2g436560 5.0kb upstream 5.0kb upstream 5000 false chr2: 14228612-14233611 Medicago truncatula
Medtr2g436560 5.0kb downstream 5.0kb downstream 6270 true chr2: 14222342-14228611 Medicago truncatula
Medtr2g436560 5.0kb downstream 5.0kb downstream 5000 false chr2: 14222342-14227341 Medicago truncatula
Medtr2g436560 10.0kb upstream 10.0kb upstream 11270 true chr2: 14227342-14238611 Medicago truncatula
Medtr2g436560 10.0kb upstream 10.0kb upstream 10000 false chr2: 14228612-14238611 Medicago truncatula
Medtr2g436560 10.0kb downstream 10.0kb downstream 11270 true chr2: 14217342-14228611 Medicago truncatula
Medtr2g436560 10.0kb downstream 10.0kb downstream 10000 false chr2: 14217342-14227341 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304438 5265 Fabidae View MSA
124060404 5270 Rosid View MSA
123743637 5271 Pentapetalae View MSA
122792301 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.994     High High
cufflinks 16.053     High  
cufflinks 13.849     High  
cufflinks 16.34     High  
cufflinks 14.823     High  
cufflinks 13.472     High Low
cufflinks 16.172     High  
cufflinks 13.228     High Low
cufflinks 20.233     High High

0 Strain