Gene : Medtr2g436530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22844//PTHR22844:SF235 - F-BOX AND WD40 DOMAIN PROTEIN Description:  E3 ubiquitin-protein ligase LIN-like protein, putative
Genomic Order:  1969 Name:  ? Medtr2g436530
Secondary Identifier:  ? PAC:31066235
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g436530 0.5kb upstream 0.5kb upstream 7825 true chr2: 14206242-14214066 Medicago truncatula
Medtr2g436530 0.5kb upstream 0.5kb upstream 500 false chr2: 14213567-14214066 Medicago truncatula
Medtr2g436530 0.5kb downstream 0.5kb downstream 7825 true chr2: 14205742-14213566 Medicago truncatula
Medtr2g436530 0.5kb downstream 0.5kb downstream 500 false chr2: 14205742-14206241 Medicago truncatula
Medtr2g436530 1.0kb upstream 1.0kb upstream 8325 true chr2: 14206242-14214566 Medicago truncatula
Medtr2g436530 1.0kb upstream 1.0kb upstream 1000 false chr2: 14213567-14214566 Medicago truncatula
Medtr2g436530 1.0kb downstream 1.0kb downstream 8325 true chr2: 14205242-14213566 Medicago truncatula
Medtr2g436530 1.0kb downstream 1.0kb downstream 1000 false chr2: 14205242-14206241 Medicago truncatula
Medtr2g436530 2.0kb upstream 2.0kb upstream 9325 true chr2: 14206242-14215566 Medicago truncatula
Medtr2g436530 2.0kb upstream 2.0kb upstream 2000 false chr2: 14213567-14215566 Medicago truncatula
Medtr2g436530 2.0kb downstream 2.0kb downstream 9325 true chr2: 14204242-14213566 Medicago truncatula
Medtr2g436530 2.0kb downstream 2.0kb downstream 2000 false chr2: 14204242-14206241 Medicago truncatula
Medtr2g436530 5.0kb upstream 5.0kb upstream 12325 true chr2: 14206242-14218566 Medicago truncatula
Medtr2g436530 5.0kb upstream 5.0kb upstream 5000 false chr2: 14213567-14218566 Medicago truncatula
Medtr2g436530 5.0kb downstream 5.0kb downstream 12325 true chr2: 14201242-14213566 Medicago truncatula
Medtr2g436530 5.0kb downstream 5.0kb downstream 5000 false chr2: 14201242-14206241 Medicago truncatula
Medtr2g436530 10.0kb upstream 10.0kb upstream 17325 true chr2: 14206242-14223566 Medicago truncatula
Medtr2g436530 10.0kb upstream 10.0kb upstream 10000 false chr2: 14213567-14223566 Medicago truncatula
Medtr2g436530 10.0kb downstream 10.0kb downstream 17325 true chr2: 14196242-14213566 Medicago truncatula
Medtr2g436530 10.0kb downstream 10.0kb downstream 10000 false chr2: 14196242-14206241 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301075 5265 Fabidae View MSA
124069728 5270 Rosid View MSA
123741699 5271 Pentapetalae View MSA
122795332 5272 Eudicot View MSA
122049229 5273 Angiosperm View MSA
121348338 5274 Embryophyte View MSA
123380824 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.285        
cufflinks 11.815     High  
cufflinks 13.351     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.699     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 9.361     High  
cufflinks 0.069     Low Low

0 Strain