Gene : Medtr2g097630 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12416:SF3 - RRNA-PROCESSING PROTEIN UTP23 HOMOLOG Description:  rRNA-processing protein PIN domain protein
Genomic Order:  5290 Name:  ? Medtr2g097630
Secondary Identifier:  ? PAC:31064957
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g097630 0.5kb upstream 0.5kb upstream 5924 true chr2: 41700539-41706462 Medicago truncatula
Medtr2g097630 0.5kb upstream 0.5kb upstream 500 false chr2: 41700539-41701038 Medicago truncatula
Medtr2g097630 0.5kb downstream 0.5kb downstream 5924 true chr2: 41701039-41706962 Medicago truncatula
Medtr2g097630 0.5kb downstream 0.5kb downstream 500 false chr2: 41706463-41706962 Medicago truncatula
Medtr2g097630 1.0kb upstream 1.0kb upstream 6424 true chr2: 41700039-41706462 Medicago truncatula
Medtr2g097630 1.0kb upstream 1.0kb upstream 1000 false chr2: 41700039-41701038 Medicago truncatula
Medtr2g097630 1.0kb downstream 1.0kb downstream 6424 true chr2: 41701039-41707462 Medicago truncatula
Medtr2g097630 1.0kb downstream 1.0kb downstream 1000 false chr2: 41706463-41707462 Medicago truncatula
Medtr2g097630 2.0kb upstream 2.0kb upstream 7424 true chr2: 41699039-41706462 Medicago truncatula
Medtr2g097630 2.0kb upstream 2.0kb upstream 2000 false chr2: 41699039-41701038 Medicago truncatula
Medtr2g097630 2.0kb downstream 2.0kb downstream 7424 true chr2: 41701039-41708462 Medicago truncatula
Medtr2g097630 2.0kb downstream 2.0kb downstream 2000 false chr2: 41706463-41708462 Medicago truncatula
Medtr2g097630 5.0kb upstream 5.0kb upstream 10424 true chr2: 41696039-41706462 Medicago truncatula
Medtr2g097630 5.0kb upstream 5.0kb upstream 5000 false chr2: 41696039-41701038 Medicago truncatula
Medtr2g097630 5.0kb downstream 5.0kb downstream 10424 true chr2: 41701039-41711462 Medicago truncatula
Medtr2g097630 5.0kb downstream 5.0kb downstream 5000 false chr2: 41706463-41711462 Medicago truncatula
Medtr2g097630 10.0kb upstream 10.0kb upstream 15424 true chr2: 41691039-41706462 Medicago truncatula
Medtr2g097630 10.0kb upstream 10.0kb upstream 10000 false chr2: 41691039-41701038 Medicago truncatula
Medtr2g097630 10.0kb downstream 10.0kb downstream 15424 true chr2: 41701039-41716462 Medicago truncatula
Medtr2g097630 10.0kb downstream 10.0kb downstream 10000 false chr2: 41706463-41716462 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302524 5265 Fabidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.271       High
cufflinks 0.352        
cufflinks 0.371        
cufflinks 1.296        
cufflinks 0.325        
cufflinks 0.75        
cufflinks 3.015       High
cufflinks 0.258       Low
cufflinks 2.116        

0 Strain