Gene : Medtr2g098490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00132//PF00199//PF00501//PF00550//PF13450 - Bacterial transferase hexapeptide (six repeats) (Hexapep) // Catalase (Catalase) // AMP-binding enzyme (AMP-binding) // Phosphopantetheine attachment site (PP-binding) // NAD(P)-binding Rossmann-like domain (NAD_binding_8) Description:  AMP-binding enzyme
Genomic Order:  5350 Name:  ? Medtr2g098490
Secondary Identifier:  ? PAC:31062428
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g098490 0.5kb upstream 0.5kb upstream 8840 true chr2: 42123120-42131959 Medicago truncatula
Medtr2g098490 0.5kb upstream 0.5kb upstream 500 false chr2: 42131460-42131959 Medicago truncatula
Medtr2g098490 0.5kb downstream 0.5kb downstream 8840 true chr2: 42122620-42131459 Medicago truncatula
Medtr2g098490 0.5kb downstream 0.5kb downstream 500 false chr2: 42122620-42123119 Medicago truncatula
Medtr2g098490 1.0kb upstream 1.0kb upstream 9340 true chr2: 42123120-42132459 Medicago truncatula
Medtr2g098490 1.0kb upstream 1.0kb upstream 1000 false chr2: 42131460-42132459 Medicago truncatula
Medtr2g098490 1.0kb downstream 1.0kb downstream 9340 true chr2: 42122120-42131459 Medicago truncatula
Medtr2g098490 1.0kb downstream 1.0kb downstream 1000 false chr2: 42122120-42123119 Medicago truncatula
Medtr2g098490 2.0kb upstream 2.0kb upstream 10340 true chr2: 42123120-42133459 Medicago truncatula
Medtr2g098490 2.0kb upstream 2.0kb upstream 2000 false chr2: 42131460-42133459 Medicago truncatula
Medtr2g098490 2.0kb downstream 2.0kb downstream 10340 true chr2: 42121120-42131459 Medicago truncatula
Medtr2g098490 2.0kb downstream 2.0kb downstream 2000 false chr2: 42121120-42123119 Medicago truncatula
Medtr2g098490 5.0kb upstream 5.0kb upstream 13340 true chr2: 42123120-42136459 Medicago truncatula
Medtr2g098490 5.0kb upstream 5.0kb upstream 5000 false chr2: 42131460-42136459 Medicago truncatula
Medtr2g098490 5.0kb downstream 5.0kb downstream 13340 true chr2: 42118120-42131459 Medicago truncatula
Medtr2g098490 5.0kb downstream 5.0kb downstream 5000 false chr2: 42118120-42123119 Medicago truncatula
Medtr2g098490 10.0kb upstream 10.0kb upstream 18340 true chr2: 42123120-42141459 Medicago truncatula
Medtr2g098490 10.0kb upstream 10.0kb upstream 10000 false chr2: 42131460-42141459 Medicago truncatula
Medtr2g098490 10.0kb downstream 10.0kb downstream 18340 true chr2: 42113120-42131459 Medicago truncatula
Medtr2g098490 10.0kb downstream 10.0kb downstream 10000 false chr2: 42113120-42123119 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309922 5265 Fabidae View MSA
124070330 5270 Rosid View MSA
123742456 5271 Pentapetalae View MSA
122795163 5272 Eudicot View MSA
122048169 5273 Angiosperm View MSA
121310872 5274 Embryophyte View MSA
123426250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low High
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain