Gene : Medtr2g099380 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Description:  RabGAP/TBC domain protein
Genomic Order:  5408 Name:  ? Medtr2g099380
Secondary Identifier:  ? PAC:31064398
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g099380 0.5kb upstream 0.5kb upstream 6270 true chr2: 42597539-42603808 Medicago truncatula
Medtr2g099380 0.5kb upstream 0.5kb upstream 500 false chr2: 42597539-42598038 Medicago truncatula
Medtr2g099380 0.5kb downstream 0.5kb downstream 6270 true chr2: 42598039-42604308 Medicago truncatula
Medtr2g099380 0.5kb downstream 0.5kb downstream 500 false chr2: 42603809-42604308 Medicago truncatula
Medtr2g099380 1.0kb upstream 1.0kb upstream 6770 true chr2: 42597039-42603808 Medicago truncatula
Medtr2g099380 1.0kb upstream 1.0kb upstream 1000 false chr2: 42597039-42598038 Medicago truncatula
Medtr2g099380 1.0kb downstream 1.0kb downstream 6770 true chr2: 42598039-42604808 Medicago truncatula
Medtr2g099380 1.0kb downstream 1.0kb downstream 1000 false chr2: 42603809-42604808 Medicago truncatula
Medtr2g099380 2.0kb upstream 2.0kb upstream 7770 true chr2: 42596039-42603808 Medicago truncatula
Medtr2g099380 2.0kb upstream 2.0kb upstream 2000 false chr2: 42596039-42598038 Medicago truncatula
Medtr2g099380 2.0kb downstream 2.0kb downstream 7770 true chr2: 42598039-42605808 Medicago truncatula
Medtr2g099380 2.0kb downstream 2.0kb downstream 2000 false chr2: 42603809-42605808 Medicago truncatula
Medtr2g099380 5.0kb upstream 5.0kb upstream 10770 true chr2: 42593039-42603808 Medicago truncatula
Medtr2g099380 5.0kb upstream 5.0kb upstream 5000 false chr2: 42593039-42598038 Medicago truncatula
Medtr2g099380 5.0kb downstream 5.0kb downstream 10770 true chr2: 42598039-42608808 Medicago truncatula
Medtr2g099380 5.0kb downstream 5.0kb downstream 5000 false chr2: 42603809-42608808 Medicago truncatula
Medtr2g099380 10.0kb upstream 10.0kb upstream 15770 true chr2: 42588039-42603808 Medicago truncatula
Medtr2g099380 10.0kb upstream 10.0kb upstream 10000 false chr2: 42588039-42598038 Medicago truncatula
Medtr2g099380 10.0kb downstream 10.0kb downstream 15770 true chr2: 42598039-42613808 Medicago truncatula
Medtr2g099380 10.0kb downstream 10.0kb downstream 10000 false chr2: 42603809-42613808 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312495 5265 Fabidae View MSA
124067650 5270 Rosid View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.026       High
cufflinks 1.985        
cufflinks 2.268        
cufflinks 0.922        
cufflinks 2.642        
cufflinks 0.521       Low
cufflinks 1.401        
cufflinks 2.0        
cufflinks 1.453        

0 Strain