Gene : Medtr2g099075 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF07728//PF10431 - AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) Description:  101 kDa heat shock protein
Genomic Order:  5389 Name:  ? Medtr2g099075
Secondary Identifier:  ? PAC:31068138
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g099075 0.5kb upstream 0.5kb upstream 2438 true chr2: 42448808-42451245 Medicago truncatula
Medtr2g099075 0.5kb upstream 0.5kb upstream 500 false chr2: 42450746-42451245 Medicago truncatula
Medtr2g099075 0.5kb downstream 0.5kb downstream 2438 true chr2: 42448308-42450745 Medicago truncatula
Medtr2g099075 0.5kb downstream 0.5kb downstream 500 false chr2: 42448308-42448807 Medicago truncatula
Medtr2g099075 1.0kb upstream 1.0kb upstream 2938 true chr2: 42448808-42451745 Medicago truncatula
Medtr2g099075 1.0kb upstream 1.0kb upstream 1000 false chr2: 42450746-42451745 Medicago truncatula
Medtr2g099075 1.0kb downstream 1.0kb downstream 2938 true chr2: 42447808-42450745 Medicago truncatula
Medtr2g099075 1.0kb downstream 1.0kb downstream 1000 false chr2: 42447808-42448807 Medicago truncatula
Medtr2g099075 2.0kb upstream 2.0kb upstream 3938 true chr2: 42448808-42452745 Medicago truncatula
Medtr2g099075 2.0kb upstream 2.0kb upstream 2000 false chr2: 42450746-42452745 Medicago truncatula
Medtr2g099075 2.0kb downstream 2.0kb downstream 3938 true chr2: 42446808-42450745 Medicago truncatula
Medtr2g099075 2.0kb downstream 2.0kb downstream 2000 false chr2: 42446808-42448807 Medicago truncatula
Medtr2g099075 5.0kb upstream 5.0kb upstream 6938 true chr2: 42448808-42455745 Medicago truncatula
Medtr2g099075 5.0kb upstream 5.0kb upstream 5000 false chr2: 42450746-42455745 Medicago truncatula
Medtr2g099075 5.0kb downstream 5.0kb downstream 6938 true chr2: 42443808-42450745 Medicago truncatula
Medtr2g099075 5.0kb downstream 5.0kb downstream 5000 false chr2: 42443808-42448807 Medicago truncatula
Medtr2g099075 10.0kb upstream 10.0kb upstream 11938 true chr2: 42448808-42460745 Medicago truncatula
Medtr2g099075 10.0kb upstream 10.0kb upstream 10000 false chr2: 42450746-42460745 Medicago truncatula
Medtr2g099075 10.0kb downstream 10.0kb downstream 11938 true chr2: 42438808-42450745 Medicago truncatula
Medtr2g099075 10.0kb downstream 10.0kb downstream 10000 false chr2: 42438808-42448807 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312505 5265 Fabidae View MSA
124072221 5270 Rosid View MSA
123747795 5271 Pentapetalae View MSA
122795236 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.035     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain