Gene : Medtr2g098880 M. truncatula Mt4.0v1
Defline:  (1 of 70) PF03101 - FAR1 DNA-binding domain (FAR1) Description:  FAR-RED impaired response-like protein
Genomic Order:  5375 Name:  ? Medtr2g098880
Secondary Identifier:  ? PAC:31066044
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g098880 0.5kb upstream 0.5kb upstream 4833 true chr2: 42333548-42338380 Medicago truncatula
Medtr2g098880 0.5kb upstream 0.5kb upstream 500 false chr2: 42333548-42334047 Medicago truncatula
Medtr2g098880 0.5kb downstream 0.5kb downstream 4833 true chr2: 42334048-42338880 Medicago truncatula
Medtr2g098880 0.5kb downstream 0.5kb downstream 500 false chr2: 42338381-42338880 Medicago truncatula
Medtr2g098880 1.0kb upstream 1.0kb upstream 5333 true chr2: 42333048-42338380 Medicago truncatula
Medtr2g098880 1.0kb upstream 1.0kb upstream 1000 false chr2: 42333048-42334047 Medicago truncatula
Medtr2g098880 1.0kb downstream 1.0kb downstream 5333 true chr2: 42334048-42339380 Medicago truncatula
Medtr2g098880 1.0kb downstream 1.0kb downstream 1000 false chr2: 42338381-42339380 Medicago truncatula
Medtr2g098880 2.0kb upstream 2.0kb upstream 6333 true chr2: 42332048-42338380 Medicago truncatula
Medtr2g098880 2.0kb upstream 2.0kb upstream 2000 false chr2: 42332048-42334047 Medicago truncatula
Medtr2g098880 2.0kb downstream 2.0kb downstream 6333 true chr2: 42334048-42340380 Medicago truncatula
Medtr2g098880 2.0kb downstream 2.0kb downstream 2000 false chr2: 42338381-42340380 Medicago truncatula
Medtr2g098880 5.0kb upstream 5.0kb upstream 9333 true chr2: 42329048-42338380 Medicago truncatula
Medtr2g098880 5.0kb upstream 5.0kb upstream 5000 false chr2: 42329048-42334047 Medicago truncatula
Medtr2g098880 5.0kb downstream 5.0kb downstream 9333 true chr2: 42334048-42343380 Medicago truncatula
Medtr2g098880 5.0kb downstream 5.0kb downstream 5000 false chr2: 42338381-42343380 Medicago truncatula
Medtr2g098880 10.0kb upstream 10.0kb upstream 14333 true chr2: 42324048-42338380 Medicago truncatula
Medtr2g098880 10.0kb upstream 10.0kb upstream 10000 false chr2: 42324048-42334047 Medicago truncatula
Medtr2g098880 10.0kb downstream 10.0kb downstream 14333 true chr2: 42334048-42348380 Medicago truncatula
Medtr2g098880 10.0kb downstream 10.0kb downstream 10000 false chr2: 42338381-42348380 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304102 5265 Fabidae View MSA
124071849 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.402        
cufflinks 0.91        
cufflinks 1.773       High
cufflinks 0.135       Low
cufflinks 1.839       High
cufflinks 0.083     Low Low
cufflinks 0.287        
cufflinks 1.303        
cufflinks 0.146        

0 Strain