Gene : Medtr2g099620 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR24031:SF294 - EUKARYOTIC INITIATION FACTOR 4A-1-RELATED Description:  DEAD-box ATP-dependent RNA helicase
Genomic Order:  5429 Name:  ? Medtr2g099620
Secondary Identifier:  ? PAC:31064086
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g099620 0.5kb upstream 0.5kb upstream 4065 true chr2: 42715455-42719519 Medicago truncatula
Medtr2g099620 0.5kb upstream 0.5kb upstream 500 false chr2: 42715455-42715954 Medicago truncatula
Medtr2g099620 0.5kb downstream 0.5kb downstream 4065 true chr2: 42715955-42720019 Medicago truncatula
Medtr2g099620 0.5kb downstream 0.5kb downstream 500 false chr2: 42719520-42720019 Medicago truncatula
Medtr2g099620 1.0kb upstream 1.0kb upstream 4565 true chr2: 42714955-42719519 Medicago truncatula
Medtr2g099620 1.0kb upstream 1.0kb upstream 1000 false chr2: 42714955-42715954 Medicago truncatula
Medtr2g099620 1.0kb downstream 1.0kb downstream 4565 true chr2: 42715955-42720519 Medicago truncatula
Medtr2g099620 1.0kb downstream 1.0kb downstream 1000 false chr2: 42719520-42720519 Medicago truncatula
Medtr2g099620 2.0kb upstream 2.0kb upstream 5565 true chr2: 42713955-42719519 Medicago truncatula
Medtr2g099620 2.0kb upstream 2.0kb upstream 2000 false chr2: 42713955-42715954 Medicago truncatula
Medtr2g099620 2.0kb downstream 2.0kb downstream 5565 true chr2: 42715955-42721519 Medicago truncatula
Medtr2g099620 2.0kb downstream 2.0kb downstream 2000 false chr2: 42719520-42721519 Medicago truncatula
Medtr2g099620 5.0kb upstream 5.0kb upstream 8565 true chr2: 42710955-42719519 Medicago truncatula
Medtr2g099620 5.0kb upstream 5.0kb upstream 5000 false chr2: 42710955-42715954 Medicago truncatula
Medtr2g099620 5.0kb downstream 5.0kb downstream 8565 true chr2: 42715955-42724519 Medicago truncatula
Medtr2g099620 5.0kb downstream 5.0kb downstream 5000 false chr2: 42719520-42724519 Medicago truncatula
Medtr2g099620 10.0kb upstream 10.0kb upstream 13565 true chr2: 42705955-42719519 Medicago truncatula
Medtr2g099620 10.0kb upstream 10.0kb upstream 10000 false chr2: 42705955-42715954 Medicago truncatula
Medtr2g099620 10.0kb downstream 10.0kb downstream 13565 true chr2: 42715955-42729519 Medicago truncatula
Medtr2g099620 10.0kb downstream 10.0kb downstream 10000 false chr2: 42719520-42729519 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315314 5265 Fabidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.896     High Low
cufflinks 20.939     High  
cufflinks 21.425     High  
cufflinks 40.6     High High
cufflinks 27.937     High  
cufflinks 9.558       Low
cufflinks 19.615     High  
cufflinks 19.727     High  
cufflinks 27.086     High  

0 Strain