Gene : Medtr2g099480 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12854 - ATAXIN 2-RELATED Description:  CTC-interacting domain protein, putative
Genomic Order:  5417 Name:  ? Medtr2g099480
Secondary Identifier:  ? PAC:31064130
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g099480 0.5kb upstream 0.5kb upstream 8088 true chr2: 42641146-42649233 Medicago truncatula
Medtr2g099480 0.5kb upstream 0.5kb upstream 500 false chr2: 42641146-42641645 Medicago truncatula
Medtr2g099480 0.5kb downstream 0.5kb downstream 8088 true chr2: 42641646-42649733 Medicago truncatula
Medtr2g099480 0.5kb downstream 0.5kb downstream 500 false chr2: 42649234-42649733 Medicago truncatula
Medtr2g099480 1.0kb upstream 1.0kb upstream 8588 true chr2: 42640646-42649233 Medicago truncatula
Medtr2g099480 1.0kb upstream 1.0kb upstream 1000 false chr2: 42640646-42641645 Medicago truncatula
Medtr2g099480 1.0kb downstream 1.0kb downstream 8588 true chr2: 42641646-42650233 Medicago truncatula
Medtr2g099480 1.0kb downstream 1.0kb downstream 1000 false chr2: 42649234-42650233 Medicago truncatula
Medtr2g099480 2.0kb upstream 2.0kb upstream 9588 true chr2: 42639646-42649233 Medicago truncatula
Medtr2g099480 2.0kb upstream 2.0kb upstream 2000 false chr2: 42639646-42641645 Medicago truncatula
Medtr2g099480 2.0kb downstream 2.0kb downstream 9588 true chr2: 42641646-42651233 Medicago truncatula
Medtr2g099480 2.0kb downstream 2.0kb downstream 2000 false chr2: 42649234-42651233 Medicago truncatula
Medtr2g099480 5.0kb upstream 5.0kb upstream 12588 true chr2: 42636646-42649233 Medicago truncatula
Medtr2g099480 5.0kb upstream 5.0kb upstream 5000 false chr2: 42636646-42641645 Medicago truncatula
Medtr2g099480 5.0kb downstream 5.0kb downstream 12588 true chr2: 42641646-42654233 Medicago truncatula
Medtr2g099480 5.0kb downstream 5.0kb downstream 5000 false chr2: 42649234-42654233 Medicago truncatula
Medtr2g099480 10.0kb upstream 10.0kb upstream 17588 true chr2: 42631646-42649233 Medicago truncatula
Medtr2g099480 10.0kb upstream 10.0kb upstream 10000 false chr2: 42631646-42641645 Medicago truncatula
Medtr2g099480 10.0kb downstream 10.0kb downstream 17588 true chr2: 42641646-42659233 Medicago truncatula
Medtr2g099480 10.0kb downstream 10.0kb downstream 10000 false chr2: 42649234-42659233 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295622 5265 Fabidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.166       High
cufflinks 0.643        
cufflinks 0.627        
cufflinks 0.263       Low
cufflinks 0.641        
cufflinks 0.279       Low
cufflinks 0.699        
cufflinks 0.5        
cufflinks 0.428        

0 Strain