Gene : Medtr2g100090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22850:SF85 - WD-40 REPEAT-CONTAINING PROTEIN MSI4-RELATED Description:  nucleosome/chromatin assembly factor group protein
Genomic Order:  5466 Name:  ? Medtr2g100090
Secondary Identifier:  ? PAC:31067854
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g100090 0.5kb upstream 0.5kb upstream 7127 true chr2: 42971759-42978885 Medicago truncatula
Medtr2g100090 0.5kb upstream 0.5kb upstream 500 false chr2: 42971759-42972258 Medicago truncatula
Medtr2g100090 0.5kb downstream 0.5kb downstream 7127 true chr2: 42972259-42979385 Medicago truncatula
Medtr2g100090 0.5kb downstream 0.5kb downstream 500 false chr2: 42978886-42979385 Medicago truncatula
Medtr2g100090 1.0kb upstream 1.0kb upstream 7627 true chr2: 42971259-42978885 Medicago truncatula
Medtr2g100090 1.0kb upstream 1.0kb upstream 1000 false chr2: 42971259-42972258 Medicago truncatula
Medtr2g100090 1.0kb downstream 1.0kb downstream 7627 true chr2: 42972259-42979885 Medicago truncatula
Medtr2g100090 1.0kb downstream 1.0kb downstream 1000 false chr2: 42978886-42979885 Medicago truncatula
Medtr2g100090 2.0kb upstream 2.0kb upstream 8627 true chr2: 42970259-42978885 Medicago truncatula
Medtr2g100090 2.0kb upstream 2.0kb upstream 2000 false chr2: 42970259-42972258 Medicago truncatula
Medtr2g100090 2.0kb downstream 2.0kb downstream 8627 true chr2: 42972259-42980885 Medicago truncatula
Medtr2g100090 2.0kb downstream 2.0kb downstream 2000 false chr2: 42978886-42980885 Medicago truncatula
Medtr2g100090 5.0kb upstream 5.0kb upstream 11627 true chr2: 42967259-42978885 Medicago truncatula
Medtr2g100090 5.0kb upstream 5.0kb upstream 5000 false chr2: 42967259-42972258 Medicago truncatula
Medtr2g100090 5.0kb downstream 5.0kb downstream 11627 true chr2: 42972259-42983885 Medicago truncatula
Medtr2g100090 5.0kb downstream 5.0kb downstream 5000 false chr2: 42978886-42983885 Medicago truncatula
Medtr2g100090 10.0kb upstream 10.0kb upstream 16627 true chr2: 42962259-42978885 Medicago truncatula
Medtr2g100090 10.0kb upstream 10.0kb upstream 10000 false chr2: 42962259-42972258 Medicago truncatula
Medtr2g100090 10.0kb downstream 10.0kb downstream 16627 true chr2: 42972259-42988885 Medicago truncatula
Medtr2g100090 10.0kb downstream 10.0kb downstream 10000 false chr2: 42978886-42988885 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041058 5273 Angiosperm View MSA
122296794 5265 Fabidae View MSA
124070712 5270 Rosid View MSA
123743573 5271 Pentapetalae View MSA
122790330 5272 Eudicot View MSA
121347488 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236        
cufflinks 0.348        
cufflinks 0.324        
cufflinks 0.095        
cufflinks 0.453        
cufflinks 0.009     Low Low
cufflinks 0.256        
cufflinks 0.321        
cufflinks 0.569        

0 Strain