Gene : Medtr2g100420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10476//PTHR10476:SF11 - CHARGED MULTIVESICULAR BODY PROTEIN Description:  charged multivesicular body protein
Genomic Order:  5493 Name:  ? Medtr2g100420
Secondary Identifier:  ? PAC:31063511
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g100420 0.5kb upstream 0.5kb upstream 1670 true chr2: 43152380-43154049 Medicago truncatula
Medtr2g100420 0.5kb upstream 0.5kb upstream 500 false chr2: 43153550-43154049 Medicago truncatula
Medtr2g100420 0.5kb downstream 0.5kb downstream 1670 true chr2: 43151880-43153549 Medicago truncatula
Medtr2g100420 0.5kb downstream 0.5kb downstream 500 false chr2: 43151880-43152379 Medicago truncatula
Medtr2g100420 1.0kb upstream 1.0kb upstream 2170 true chr2: 43152380-43154549 Medicago truncatula
Medtr2g100420 1.0kb upstream 1.0kb upstream 1000 false chr2: 43153550-43154549 Medicago truncatula
Medtr2g100420 1.0kb downstream 1.0kb downstream 2170 true chr2: 43151380-43153549 Medicago truncatula
Medtr2g100420 1.0kb downstream 1.0kb downstream 1000 false chr2: 43151380-43152379 Medicago truncatula
Medtr2g100420 2.0kb upstream 2.0kb upstream 3170 true chr2: 43152380-43155549 Medicago truncatula
Medtr2g100420 2.0kb upstream 2.0kb upstream 2000 false chr2: 43153550-43155549 Medicago truncatula
Medtr2g100420 2.0kb downstream 2.0kb downstream 3170 true chr2: 43150380-43153549 Medicago truncatula
Medtr2g100420 2.0kb downstream 2.0kb downstream 2000 false chr2: 43150380-43152379 Medicago truncatula
Medtr2g100420 5.0kb upstream 5.0kb upstream 6170 true chr2: 43152380-43158549 Medicago truncatula
Medtr2g100420 5.0kb upstream 5.0kb upstream 5000 false chr2: 43153550-43158549 Medicago truncatula
Medtr2g100420 5.0kb downstream 5.0kb downstream 6170 true chr2: 43147380-43153549 Medicago truncatula
Medtr2g100420 5.0kb downstream 5.0kb downstream 5000 false chr2: 43147380-43152379 Medicago truncatula
Medtr2g100420 10.0kb upstream 10.0kb upstream 11170 true chr2: 43152380-43163549 Medicago truncatula
Medtr2g100420 10.0kb upstream 10.0kb upstream 10000 false chr2: 43153550-43163549 Medicago truncatula
Medtr2g100420 10.0kb downstream 10.0kb downstream 11170 true chr2: 43142380-43153549 Medicago truncatula
Medtr2g100420 10.0kb downstream 10.0kb downstream 10000 false chr2: 43142380-43152379 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313767 5265 Fabidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.575     High  
cufflinks 99.478     High  
cufflinks 105.928     High  
cufflinks 142.58     High High
cufflinks 88.72     High Low
cufflinks 97.462     High  
cufflinks 127.852     High  
cufflinks 96.997     High  
cufflinks 153.425     High High

0 Strain