Gene : Medtr2g101290 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  5539 Name:  ? Medtr2g101290
Secondary Identifier:  ? PAC:31064006
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g101290 0.5kb upstream 0.5kb upstream 6652 true chr2: 43539400-43546051 Medicago truncatula
Medtr2g101290 0.5kb upstream 0.5kb upstream 500 false chr2: 43539400-43539899 Medicago truncatula
Medtr2g101290 0.5kb downstream 0.5kb downstream 6652 true chr2: 43539900-43546551 Medicago truncatula
Medtr2g101290 0.5kb downstream 0.5kb downstream 500 false chr2: 43546052-43546551 Medicago truncatula
Medtr2g101290 1.0kb upstream 1.0kb upstream 7152 true chr2: 43538900-43546051 Medicago truncatula
Medtr2g101290 1.0kb upstream 1.0kb upstream 1000 false chr2: 43538900-43539899 Medicago truncatula
Medtr2g101290 1.0kb downstream 1.0kb downstream 7152 true chr2: 43539900-43547051 Medicago truncatula
Medtr2g101290 1.0kb downstream 1.0kb downstream 1000 false chr2: 43546052-43547051 Medicago truncatula
Medtr2g101290 2.0kb upstream 2.0kb upstream 8152 true chr2: 43537900-43546051 Medicago truncatula
Medtr2g101290 2.0kb upstream 2.0kb upstream 2000 false chr2: 43537900-43539899 Medicago truncatula
Medtr2g101290 2.0kb downstream 2.0kb downstream 8152 true chr2: 43539900-43548051 Medicago truncatula
Medtr2g101290 2.0kb downstream 2.0kb downstream 2000 false chr2: 43546052-43548051 Medicago truncatula
Medtr2g101290 5.0kb upstream 5.0kb upstream 11152 true chr2: 43534900-43546051 Medicago truncatula
Medtr2g101290 5.0kb upstream 5.0kb upstream 5000 false chr2: 43534900-43539899 Medicago truncatula
Medtr2g101290 5.0kb downstream 5.0kb downstream 11152 true chr2: 43539900-43551051 Medicago truncatula
Medtr2g101290 5.0kb downstream 5.0kb downstream 5000 false chr2: 43546052-43551051 Medicago truncatula
Medtr2g101290 10.0kb upstream 10.0kb upstream 16152 true chr2: 43529900-43546051 Medicago truncatula
Medtr2g101290 10.0kb upstream 10.0kb upstream 10000 false chr2: 43529900-43539899 Medicago truncatula
Medtr2g101290 10.0kb downstream 10.0kb downstream 16152 true chr2: 43539900-43556051 Medicago truncatula
Medtr2g101290 10.0kb downstream 10.0kb downstream 10000 false chr2: 43546052-43556051 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306088 5265 Fabidae View MSA
124063908 5270 Rosid View MSA
123740118 5271 Pentapetalae View MSA
122786988 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.614        
cufflinks 5.716        
cufflinks 5.343        
cufflinks 0.247       Low
cufflinks 9.208       High
cufflinks 0.228       Low
cufflinks 0.71        
cufflinks 5.752        
cufflinks 0.834        

0 Strain