Gene : Medtr2g100930 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24078:SF169 - DNAJ HOMOLOG SUBFAMILY C MEMBER 17 Description:  MYB-like transcription factor family protein
Genomic Order:  5530 Name:  ? Medtr2g100930
Secondary Identifier:  ? PAC:31067845
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g100930 0.5kb upstream 0.5kb upstream 4314 true chr2: 43419497-43423810 Medicago truncatula
Medtr2g100930 0.5kb upstream 0.5kb upstream 500 false chr2: 43423311-43423810 Medicago truncatula
Medtr2g100930 0.5kb downstream 0.5kb downstream 4314 true chr2: 43418997-43423310 Medicago truncatula
Medtr2g100930 0.5kb downstream 0.5kb downstream 500 false chr2: 43418997-43419496 Medicago truncatula
Medtr2g100930 1.0kb upstream 1.0kb upstream 4814 true chr2: 43419497-43424310 Medicago truncatula
Medtr2g100930 1.0kb upstream 1.0kb upstream 1000 false chr2: 43423311-43424310 Medicago truncatula
Medtr2g100930 1.0kb downstream 1.0kb downstream 4814 true chr2: 43418497-43423310 Medicago truncatula
Medtr2g100930 1.0kb downstream 1.0kb downstream 1000 false chr2: 43418497-43419496 Medicago truncatula
Medtr2g100930 2.0kb upstream 2.0kb upstream 5814 true chr2: 43419497-43425310 Medicago truncatula
Medtr2g100930 2.0kb upstream 2.0kb upstream 2000 false chr2: 43423311-43425310 Medicago truncatula
Medtr2g100930 2.0kb downstream 2.0kb downstream 5814 true chr2: 43417497-43423310 Medicago truncatula
Medtr2g100930 2.0kb downstream 2.0kb downstream 2000 false chr2: 43417497-43419496 Medicago truncatula
Medtr2g100930 5.0kb upstream 5.0kb upstream 8814 true chr2: 43419497-43428310 Medicago truncatula
Medtr2g100930 5.0kb upstream 5.0kb upstream 5000 false chr2: 43423311-43428310 Medicago truncatula
Medtr2g100930 5.0kb downstream 5.0kb downstream 8814 true chr2: 43414497-43423310 Medicago truncatula
Medtr2g100930 5.0kb downstream 5.0kb downstream 5000 false chr2: 43414497-43419496 Medicago truncatula
Medtr2g100930 10.0kb upstream 10.0kb upstream 13814 true chr2: 43419497-43433310 Medicago truncatula
Medtr2g100930 10.0kb upstream 10.0kb upstream 10000 false chr2: 43423311-43433310 Medicago truncatula
Medtr2g100930 10.0kb downstream 10.0kb downstream 13814 true chr2: 43409497-43423310 Medicago truncatula
Medtr2g100930 10.0kb downstream 10.0kb downstream 10000 false chr2: 43409497-43419496 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308394 5265 Fabidae View MSA
124065296 5270 Rosid View MSA
123744920 5271 Pentapetalae View MSA
122787760 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.62     High  
cufflinks 10.063     High Low
cufflinks 15.51     High  
cufflinks 37.68     High High
cufflinks 7.67       Low
cufflinks 21.152     High  
cufflinks 22.194     High  
cufflinks 15.458     High  
cufflinks 20.005     High  

0 Strain