Gene : Medtr2g090900 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Description:  bZIP family transcription factor
Genomic Order:  4944 Name:  ? Medtr2g090900
Secondary Identifier:  ? PAC:31066709
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090900 0.5kb upstream 0.5kb upstream 3739 true chr2: 39027089-39030827 Medicago truncatula
Medtr2g090900 0.5kb upstream 0.5kb upstream 500 false chr2: 39027089-39027588 Medicago truncatula
Medtr2g090900 0.5kb downstream 0.5kb downstream 3739 true chr2: 39027589-39031327 Medicago truncatula
Medtr2g090900 0.5kb downstream 0.5kb downstream 500 false chr2: 39030828-39031327 Medicago truncatula
Medtr2g090900 1.0kb upstream 1.0kb upstream 4239 true chr2: 39026589-39030827 Medicago truncatula
Medtr2g090900 1.0kb upstream 1.0kb upstream 1000 false chr2: 39026589-39027588 Medicago truncatula
Medtr2g090900 1.0kb downstream 1.0kb downstream 4239 true chr2: 39027589-39031827 Medicago truncatula
Medtr2g090900 1.0kb downstream 1.0kb downstream 1000 false chr2: 39030828-39031827 Medicago truncatula
Medtr2g090900 2.0kb upstream 2.0kb upstream 5239 true chr2: 39025589-39030827 Medicago truncatula
Medtr2g090900 2.0kb upstream 2.0kb upstream 2000 false chr2: 39025589-39027588 Medicago truncatula
Medtr2g090900 2.0kb downstream 2.0kb downstream 5239 true chr2: 39027589-39032827 Medicago truncatula
Medtr2g090900 2.0kb downstream 2.0kb downstream 2000 false chr2: 39030828-39032827 Medicago truncatula
Medtr2g090900 5.0kb upstream 5.0kb upstream 8239 true chr2: 39022589-39030827 Medicago truncatula
Medtr2g090900 5.0kb upstream 5.0kb upstream 5000 false chr2: 39022589-39027588 Medicago truncatula
Medtr2g090900 5.0kb downstream 5.0kb downstream 8239 true chr2: 39027589-39035827 Medicago truncatula
Medtr2g090900 5.0kb downstream 5.0kb downstream 5000 false chr2: 39030828-39035827 Medicago truncatula
Medtr2g090900 10.0kb upstream 10.0kb upstream 13239 true chr2: 39017589-39030827 Medicago truncatula
Medtr2g090900 10.0kb upstream 10.0kb upstream 10000 false chr2: 39017589-39027588 Medicago truncatula
Medtr2g090900 10.0kb downstream 10.0kb downstream 13239 true chr2: 39027589-39040827 Medicago truncatula
Medtr2g090900 10.0kb downstream 10.0kb downstream 10000 false chr2: 39030828-39040827 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312955 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.945        
cufflinks 0.652        
cufflinks 1.166        
cufflinks 0.285        
cufflinks 0.682        
cufflinks 0.051     Low Low
cufflinks 1.049        
cufflinks 0.79        
cufflinks 1.449        

0 Strain