Gene : Medtr2g090890 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12411:SF333 - CYSTEINE PROTEASE-LIKE PROTEIN-RELATED Description:  papain family cysteine protease
Genomic Order:  4942 Name:  ? Medtr2g090890
Secondary Identifier:  ? PAC:31067343
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090890 0.5kb upstream 0.5kb upstream 1916 true chr2: 39020708-39022623 Medicago truncatula
Medtr2g090890 0.5kb upstream 0.5kb upstream 500 false chr2: 39022124-39022623 Medicago truncatula
Medtr2g090890 0.5kb downstream 0.5kb downstream 1916 true chr2: 39020208-39022123 Medicago truncatula
Medtr2g090890 0.5kb downstream 0.5kb downstream 500 false chr2: 39020208-39020707 Medicago truncatula
Medtr2g090890 1.0kb upstream 1.0kb upstream 2416 true chr2: 39020708-39023123 Medicago truncatula
Medtr2g090890 1.0kb upstream 1.0kb upstream 1000 false chr2: 39022124-39023123 Medicago truncatula
Medtr2g090890 1.0kb downstream 1.0kb downstream 2416 true chr2: 39019708-39022123 Medicago truncatula
Medtr2g090890 1.0kb downstream 1.0kb downstream 1000 false chr2: 39019708-39020707 Medicago truncatula
Medtr2g090890 2.0kb upstream 2.0kb upstream 3416 true chr2: 39020708-39024123 Medicago truncatula
Medtr2g090890 2.0kb upstream 2.0kb upstream 2000 false chr2: 39022124-39024123 Medicago truncatula
Medtr2g090890 2.0kb downstream 2.0kb downstream 3416 true chr2: 39018708-39022123 Medicago truncatula
Medtr2g090890 2.0kb downstream 2.0kb downstream 2000 false chr2: 39018708-39020707 Medicago truncatula
Medtr2g090890 5.0kb upstream 5.0kb upstream 6416 true chr2: 39020708-39027123 Medicago truncatula
Medtr2g090890 5.0kb upstream 5.0kb upstream 5000 false chr2: 39022124-39027123 Medicago truncatula
Medtr2g090890 5.0kb downstream 5.0kb downstream 6416 true chr2: 39015708-39022123 Medicago truncatula
Medtr2g090890 5.0kb downstream 5.0kb downstream 5000 false chr2: 39015708-39020707 Medicago truncatula
Medtr2g090890 10.0kb upstream 10.0kb upstream 11416 true chr2: 39020708-39032123 Medicago truncatula
Medtr2g090890 10.0kb upstream 10.0kb upstream 10000 false chr2: 39022124-39032123 Medicago truncatula
Medtr2g090890 10.0kb downstream 10.0kb downstream 11416 true chr2: 39010708-39022123 Medicago truncatula
Medtr2g090890 10.0kb downstream 10.0kb downstream 10000 false chr2: 39010708-39020707 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311849 5265 Fabidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain