Gene : Medtr2g091325 M. truncatula Mt4.0v1
Defline:  (1 of 15) KOG1003 - Actin filament-coating protein tropomyosin Description:  hypothetical protein
Genomic Order:  5001 Name:  ? Medtr2g091325
Secondary Identifier:  ? PAC:31064582
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g091325 0.5kb upstream 0.5kb upstream 3425 true chr2: 39456619-39460043 Medicago truncatula
Medtr2g091325 0.5kb upstream 0.5kb upstream 500 false chr2: 39456619-39457118 Medicago truncatula
Medtr2g091325 0.5kb downstream 0.5kb downstream 3425 true chr2: 39457119-39460543 Medicago truncatula
Medtr2g091325 0.5kb downstream 0.5kb downstream 500 false chr2: 39460044-39460543 Medicago truncatula
Medtr2g091325 1.0kb upstream 1.0kb upstream 3925 true chr2: 39456119-39460043 Medicago truncatula
Medtr2g091325 1.0kb upstream 1.0kb upstream 1000 false chr2: 39456119-39457118 Medicago truncatula
Medtr2g091325 1.0kb downstream 1.0kb downstream 3925 true chr2: 39457119-39461043 Medicago truncatula
Medtr2g091325 1.0kb downstream 1.0kb downstream 1000 false chr2: 39460044-39461043 Medicago truncatula
Medtr2g091325 2.0kb upstream 2.0kb upstream 4925 true chr2: 39455119-39460043 Medicago truncatula
Medtr2g091325 2.0kb upstream 2.0kb upstream 2000 false chr2: 39455119-39457118 Medicago truncatula
Medtr2g091325 2.0kb downstream 2.0kb downstream 4925 true chr2: 39457119-39462043 Medicago truncatula
Medtr2g091325 2.0kb downstream 2.0kb downstream 2000 false chr2: 39460044-39462043 Medicago truncatula
Medtr2g091325 5.0kb upstream 5.0kb upstream 7925 true chr2: 39452119-39460043 Medicago truncatula
Medtr2g091325 5.0kb upstream 5.0kb upstream 5000 false chr2: 39452119-39457118 Medicago truncatula
Medtr2g091325 5.0kb downstream 5.0kb downstream 7925 true chr2: 39457119-39465043 Medicago truncatula
Medtr2g091325 5.0kb downstream 5.0kb downstream 5000 false chr2: 39460044-39465043 Medicago truncatula
Medtr2g091325 10.0kb upstream 10.0kb upstream 12925 true chr2: 39447119-39460043 Medicago truncatula
Medtr2g091325 10.0kb upstream 10.0kb upstream 10000 false chr2: 39447119-39457118 Medicago truncatula
Medtr2g091325 10.0kb downstream 10.0kb downstream 12925 true chr2: 39457119-39470043 Medicago truncatula
Medtr2g091325 10.0kb downstream 10.0kb downstream 10000 false chr2: 39460044-39470043 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315193 5265 Fabidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.533        
cufflinks 0.813        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.758       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.64        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain