Gene : Medtr2g091190 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR12565//PTHR12565:SF82 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Description:  transcription factor bHLH107-like protein
Genomic Order:  4983 Name:  ? Medtr2g091190
Secondary Identifier:  ? PAC:31068007
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g091190 0.5kb upstream 0.5kb upstream 2892 true chr2: 39331127-39334018 Medicago truncatula
Medtr2g091190 0.5kb upstream 0.5kb upstream 500 false chr2: 39333519-39334018 Medicago truncatula
Medtr2g091190 0.5kb downstream 0.5kb downstream 2892 true chr2: 39330627-39333518 Medicago truncatula
Medtr2g091190 0.5kb downstream 0.5kb downstream 500 false chr2: 39330627-39331126 Medicago truncatula
Medtr2g091190 1.0kb upstream 1.0kb upstream 3392 true chr2: 39331127-39334518 Medicago truncatula
Medtr2g091190 1.0kb upstream 1.0kb upstream 1000 false chr2: 39333519-39334518 Medicago truncatula
Medtr2g091190 1.0kb downstream 1.0kb downstream 3392 true chr2: 39330127-39333518 Medicago truncatula
Medtr2g091190 1.0kb downstream 1.0kb downstream 1000 false chr2: 39330127-39331126 Medicago truncatula
Medtr2g091190 2.0kb upstream 2.0kb upstream 4392 true chr2: 39331127-39335518 Medicago truncatula
Medtr2g091190 2.0kb upstream 2.0kb upstream 2000 false chr2: 39333519-39335518 Medicago truncatula
Medtr2g091190 2.0kb downstream 2.0kb downstream 4392 true chr2: 39329127-39333518 Medicago truncatula
Medtr2g091190 2.0kb downstream 2.0kb downstream 2000 false chr2: 39329127-39331126 Medicago truncatula
Medtr2g091190 5.0kb upstream 5.0kb upstream 7392 true chr2: 39331127-39338518 Medicago truncatula
Medtr2g091190 5.0kb upstream 5.0kb upstream 5000 false chr2: 39333519-39338518 Medicago truncatula
Medtr2g091190 5.0kb downstream 5.0kb downstream 7392 true chr2: 39326127-39333518 Medicago truncatula
Medtr2g091190 5.0kb downstream 5.0kb downstream 5000 false chr2: 39326127-39331126 Medicago truncatula
Medtr2g091190 10.0kb upstream 10.0kb upstream 12392 true chr2: 39331127-39343518 Medicago truncatula
Medtr2g091190 10.0kb upstream 10.0kb upstream 10000 false chr2: 39333519-39343518 Medicago truncatula
Medtr2g091190 10.0kb downstream 10.0kb downstream 12392 true chr2: 39321127-39333518 Medicago truncatula
Medtr2g091190 10.0kb downstream 10.0kb downstream 10000 false chr2: 39321127-39331126 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298441 5265 Fabidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.831     High High
cufflinks 4.753        
cufflinks 4.142        
cufflinks 13.736     High  
cufflinks 3.743       Low
cufflinks 15.788     High  
cufflinks 36.336     High High
cufflinks 4.316        
cufflinks 10.263        

0 Strain