Gene : Medtr2g093220 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED Description:  Dof domain zinc finger protein
Genomic Order:  5029 Name:  ? Medtr2g093220
Secondary Identifier:  ? PAC:31062896
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g093220 0.5kb upstream 0.5kb upstream 2852 true chr2: 39739400-39742251 Medicago truncatula
Medtr2g093220 0.5kb upstream 0.5kb upstream 500 false chr2: 39739400-39739899 Medicago truncatula
Medtr2g093220 0.5kb downstream 0.5kb downstream 2852 true chr2: 39739900-39742751 Medicago truncatula
Medtr2g093220 0.5kb downstream 0.5kb downstream 500 false chr2: 39742252-39742751 Medicago truncatula
Medtr2g093220 1.0kb upstream 1.0kb upstream 3352 true chr2: 39738900-39742251 Medicago truncatula
Medtr2g093220 1.0kb upstream 1.0kb upstream 1000 false chr2: 39738900-39739899 Medicago truncatula
Medtr2g093220 1.0kb downstream 1.0kb downstream 3352 true chr2: 39739900-39743251 Medicago truncatula
Medtr2g093220 1.0kb downstream 1.0kb downstream 1000 false chr2: 39742252-39743251 Medicago truncatula
Medtr2g093220 2.0kb upstream 2.0kb upstream 4352 true chr2: 39737900-39742251 Medicago truncatula
Medtr2g093220 2.0kb upstream 2.0kb upstream 2000 false chr2: 39737900-39739899 Medicago truncatula
Medtr2g093220 2.0kb downstream 2.0kb downstream 4352 true chr2: 39739900-39744251 Medicago truncatula
Medtr2g093220 2.0kb downstream 2.0kb downstream 2000 false chr2: 39742252-39744251 Medicago truncatula
Medtr2g093220 5.0kb upstream 5.0kb upstream 7352 true chr2: 39734900-39742251 Medicago truncatula
Medtr2g093220 5.0kb upstream 5.0kb upstream 5000 false chr2: 39734900-39739899 Medicago truncatula
Medtr2g093220 5.0kb downstream 5.0kb downstream 7352 true chr2: 39739900-39747251 Medicago truncatula
Medtr2g093220 5.0kb downstream 5.0kb downstream 5000 false chr2: 39742252-39747251 Medicago truncatula
Medtr2g093220 10.0kb upstream 10.0kb upstream 12352 true chr2: 39729900-39742251 Medicago truncatula
Medtr2g093220 10.0kb upstream 10.0kb upstream 10000 false chr2: 39729900-39739899 Medicago truncatula
Medtr2g093220 10.0kb downstream 10.0kb downstream 12352 true chr2: 39739900-39752251 Medicago truncatula
Medtr2g093220 10.0kb downstream 10.0kb downstream 10000 false chr2: 39742252-39752251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306916 5265 Fabidae View MSA
124067920 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.894       Low
cufflinks 17.136     High  
cufflinks 11.727     High  
cufflinks 24.473     High  
cufflinks 10.608     High  
cufflinks 11.986     High  
cufflinks 34.217     High High
cufflinks 14.819     High  
cufflinks 25.952     High  

0 Strain