Gene : Medtr2g093990 M. truncatula Mt4.0v1
Defline:  (1 of 14) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Description:  fasciclin-like arabinogalactan protein
Genomic Order:  5070 Name:  ? Medtr2g093990
Secondary Identifier:  ? PAC:31062657
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g093990 0.5kb upstream 0.5kb upstream 1621 true chr2: 40049995-40051615 Medicago truncatula
Medtr2g093990 0.5kb upstream 0.5kb upstream 500 false chr2: 40051116-40051615 Medicago truncatula
Medtr2g093990 0.5kb downstream 0.5kb downstream 1621 true chr2: 40049495-40051115 Medicago truncatula
Medtr2g093990 0.5kb downstream 0.5kb downstream 500 false chr2: 40049495-40049994 Medicago truncatula
Medtr2g093990 1.0kb upstream 1.0kb upstream 2121 true chr2: 40049995-40052115 Medicago truncatula
Medtr2g093990 1.0kb upstream 1.0kb upstream 1000 false chr2: 40051116-40052115 Medicago truncatula
Medtr2g093990 1.0kb downstream 1.0kb downstream 2121 true chr2: 40048995-40051115 Medicago truncatula
Medtr2g093990 1.0kb downstream 1.0kb downstream 1000 false chr2: 40048995-40049994 Medicago truncatula
Medtr2g093990 2.0kb upstream 2.0kb upstream 3121 true chr2: 40049995-40053115 Medicago truncatula
Medtr2g093990 2.0kb upstream 2.0kb upstream 2000 false chr2: 40051116-40053115 Medicago truncatula
Medtr2g093990 2.0kb downstream 2.0kb downstream 3121 true chr2: 40047995-40051115 Medicago truncatula
Medtr2g093990 2.0kb downstream 2.0kb downstream 2000 false chr2: 40047995-40049994 Medicago truncatula
Medtr2g093990 5.0kb upstream 5.0kb upstream 6121 true chr2: 40049995-40056115 Medicago truncatula
Medtr2g093990 5.0kb upstream 5.0kb upstream 5000 false chr2: 40051116-40056115 Medicago truncatula
Medtr2g093990 5.0kb downstream 5.0kb downstream 6121 true chr2: 40044995-40051115 Medicago truncatula
Medtr2g093990 5.0kb downstream 5.0kb downstream 5000 false chr2: 40044995-40049994 Medicago truncatula
Medtr2g093990 10.0kb upstream 10.0kb upstream 11121 true chr2: 40049995-40061115 Medicago truncatula
Medtr2g093990 10.0kb upstream 10.0kb upstream 10000 false chr2: 40051116-40061115 Medicago truncatula
Medtr2g093990 10.0kb downstream 10.0kb downstream 11121 true chr2: 40039995-40051115 Medicago truncatula
Medtr2g093990 10.0kb downstream 10.0kb downstream 10000 false chr2: 40039995-40049994 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314337 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low Low
cufflinks 9.759     High  
cufflinks 3.479        
cufflinks 12.349     High  
cufflinks 19.82     High  
cufflinks 1.646        
cufflinks 2.127        
cufflinks 5.723        
cufflinks 8.665        

0 Strain