Gene : Medtr2g095130 M. truncatula Mt4.0v1
Defline:  (1 of 47) PF03330 - Rare lipoprotein A (RlpA)-like double-psi beta-barrel Description:  Ripening related protein family
Genomic Order:  5140 Name:  ? Medtr2g095130
Secondary Identifier:  ? PAC:31067053
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g095130 0.5kb upstream 0.5kb upstream 1293 true chr2: 40627563-40628855 Medicago truncatula
Medtr2g095130 0.5kb upstream 0.5kb upstream 500 false chr2: 40628356-40628855 Medicago truncatula
Medtr2g095130 0.5kb downstream 0.5kb downstream 1293 true chr2: 40627063-40628355 Medicago truncatula
Medtr2g095130 0.5kb downstream 0.5kb downstream 500 false chr2: 40627063-40627562 Medicago truncatula
Medtr2g095130 1.0kb upstream 1.0kb upstream 1793 true chr2: 40627563-40629355 Medicago truncatula
Medtr2g095130 1.0kb upstream 1.0kb upstream 1000 false chr2: 40628356-40629355 Medicago truncatula
Medtr2g095130 1.0kb downstream 1.0kb downstream 1793 true chr2: 40626563-40628355 Medicago truncatula
Medtr2g095130 1.0kb downstream 1.0kb downstream 1000 false chr2: 40626563-40627562 Medicago truncatula
Medtr2g095130 2.0kb upstream 2.0kb upstream 2793 true chr2: 40627563-40630355 Medicago truncatula
Medtr2g095130 2.0kb upstream 2.0kb upstream 2000 false chr2: 40628356-40630355 Medicago truncatula
Medtr2g095130 2.0kb downstream 2.0kb downstream 2793 true chr2: 40625563-40628355 Medicago truncatula
Medtr2g095130 2.0kb downstream 2.0kb downstream 2000 false chr2: 40625563-40627562 Medicago truncatula
Medtr2g095130 5.0kb upstream 5.0kb upstream 5793 true chr2: 40627563-40633355 Medicago truncatula
Medtr2g095130 5.0kb upstream 5.0kb upstream 5000 false chr2: 40628356-40633355 Medicago truncatula
Medtr2g095130 5.0kb downstream 5.0kb downstream 5793 true chr2: 40622563-40628355 Medicago truncatula
Medtr2g095130 5.0kb downstream 5.0kb downstream 5000 false chr2: 40622563-40627562 Medicago truncatula
Medtr2g095130 10.0kb upstream 10.0kb upstream 10793 true chr2: 40627563-40638355 Medicago truncatula
Medtr2g095130 10.0kb upstream 10.0kb upstream 10000 false chr2: 40628356-40638355 Medicago truncatula
Medtr2g095130 10.0kb downstream 10.0kb downstream 10793 true chr2: 40617563-40628355 Medicago truncatula
Medtr2g095130 10.0kb downstream 10.0kb downstream 10000 false chr2: 40617563-40627562 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309705 5265 Fabidae View MSA
124069743 5270 Rosid View MSA
123742356 5271 Pentapetalae View MSA
122770271 5272 Eudicot View MSA
122049073 5273 Angiosperm View MSA
121348400 5274 Embryophyte View MSA
123380848 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.507        
cufflinks 1.681        
cufflinks 0.723       Low
cufflinks 1.578        
cufflinks 2.072        
cufflinks 1.155        
cufflinks 3.806       High
cufflinks 1.577        
cufflinks 2.454        

0 Strain