Gene : Medtr2g096870 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21726//PTHR21726:SF39 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED Description:  GTP-binding protein Obg/CgtA protein
Genomic Order:  5245 Name:  ? Medtr2g096870
Secondary Identifier:  ? PAC:31064490
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g096870 0.5kb upstream 0.5kb upstream 4262 true chr2: 41401550-41405811 Medicago truncatula
Medtr2g096870 0.5kb upstream 0.5kb upstream 500 false chr2: 41401550-41402049 Medicago truncatula
Medtr2g096870 0.5kb downstream 0.5kb downstream 4262 true chr2: 41402050-41406311 Medicago truncatula
Medtr2g096870 0.5kb downstream 0.5kb downstream 500 false chr2: 41405812-41406311 Medicago truncatula
Medtr2g096870 1.0kb upstream 1.0kb upstream 4762 true chr2: 41401050-41405811 Medicago truncatula
Medtr2g096870 1.0kb upstream 1.0kb upstream 1000 false chr2: 41401050-41402049 Medicago truncatula
Medtr2g096870 1.0kb downstream 1.0kb downstream 4762 true chr2: 41402050-41406811 Medicago truncatula
Medtr2g096870 1.0kb downstream 1.0kb downstream 1000 false chr2: 41405812-41406811 Medicago truncatula
Medtr2g096870 2.0kb upstream 2.0kb upstream 5762 true chr2: 41400050-41405811 Medicago truncatula
Medtr2g096870 2.0kb upstream 2.0kb upstream 2000 false chr2: 41400050-41402049 Medicago truncatula
Medtr2g096870 2.0kb downstream 2.0kb downstream 5762 true chr2: 41402050-41407811 Medicago truncatula
Medtr2g096870 2.0kb downstream 2.0kb downstream 2000 false chr2: 41405812-41407811 Medicago truncatula
Medtr2g096870 5.0kb upstream 5.0kb upstream 8762 true chr2: 41397050-41405811 Medicago truncatula
Medtr2g096870 5.0kb upstream 5.0kb upstream 5000 false chr2: 41397050-41402049 Medicago truncatula
Medtr2g096870 5.0kb downstream 5.0kb downstream 8762 true chr2: 41402050-41410811 Medicago truncatula
Medtr2g096870 5.0kb downstream 5.0kb downstream 5000 false chr2: 41405812-41410811 Medicago truncatula
Medtr2g096870 10.0kb upstream 10.0kb upstream 13762 true chr2: 41392050-41405811 Medicago truncatula
Medtr2g096870 10.0kb upstream 10.0kb upstream 10000 false chr2: 41392050-41402049 Medicago truncatula
Medtr2g096870 10.0kb downstream 10.0kb downstream 13762 true chr2: 41402050-41415811 Medicago truncatula
Medtr2g096870 10.0kb downstream 10.0kb downstream 10000 false chr2: 41405812-41415811 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313122 5265 Fabidae View MSA
124071026 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.773     High High
cufflinks 0.993       Low
cufflinks 3.112        
cufflinks 5.453        
cufflinks 1.701        
cufflinks 7.375        
cufflinks 10.404     High  
cufflinks 2.0        
cufflinks 3.399        

0 Strain