Gene : Medtr2g096330 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21327:SF7 - MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 3, CHLOROPLASTIC Description:  3,4-dihydroxy-2-butanone 4-phosphate synthase
Genomic Order:  5208 Name:  ? Medtr2g096330
Secondary Identifier:  ? PAC:31065479
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula RIBOSYN2-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g096330 0.5kb upstream 0.5kb upstream 3342 true chr2: 41149703-41153044 Medicago truncatula
Medtr2g096330 0.5kb upstream 0.5kb upstream 500 false chr2: 41149703-41150202 Medicago truncatula
Medtr2g096330 0.5kb downstream 0.5kb downstream 3342 true chr2: 41150203-41153544 Medicago truncatula
Medtr2g096330 0.5kb downstream 0.5kb downstream 500 false chr2: 41153045-41153544 Medicago truncatula
Medtr2g096330 1.0kb upstream 1.0kb upstream 3842 true chr2: 41149203-41153044 Medicago truncatula
Medtr2g096330 1.0kb upstream 1.0kb upstream 1000 false chr2: 41149203-41150202 Medicago truncatula
Medtr2g096330 1.0kb downstream 1.0kb downstream 3842 true chr2: 41150203-41154044 Medicago truncatula
Medtr2g096330 1.0kb downstream 1.0kb downstream 1000 false chr2: 41153045-41154044 Medicago truncatula
Medtr2g096330 2.0kb upstream 2.0kb upstream 4842 true chr2: 41148203-41153044 Medicago truncatula
Medtr2g096330 2.0kb upstream 2.0kb upstream 2000 false chr2: 41148203-41150202 Medicago truncatula
Medtr2g096330 2.0kb downstream 2.0kb downstream 4842 true chr2: 41150203-41155044 Medicago truncatula
Medtr2g096330 2.0kb downstream 2.0kb downstream 2000 false chr2: 41153045-41155044 Medicago truncatula
Medtr2g096330 5.0kb upstream 5.0kb upstream 7842 true chr2: 41145203-41153044 Medicago truncatula
Medtr2g096330 5.0kb upstream 5.0kb upstream 5000 false chr2: 41145203-41150202 Medicago truncatula
Medtr2g096330 5.0kb downstream 5.0kb downstream 7842 true chr2: 41150203-41158044 Medicago truncatula
Medtr2g096330 5.0kb downstream 5.0kb downstream 5000 false chr2: 41153045-41158044 Medicago truncatula
Medtr2g096330 10.0kb upstream 10.0kb upstream 12842 true chr2: 41140203-41153044 Medicago truncatula
Medtr2g096330 10.0kb upstream 10.0kb upstream 10000 false chr2: 41140203-41150202 Medicago truncatula
Medtr2g096330 10.0kb downstream 10.0kb downstream 12842 true chr2: 41150203-41163044 Medicago truncatula
Medtr2g096330 10.0kb downstream 10.0kb downstream 10000 false chr2: 41153045-41163044 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306729 5265 Fabidae View MSA
124062618 5270 Rosid View MSA
123745495 5271 Pentapetalae View MSA
122786383 5272 Eudicot View MSA
122046960 5273 Angiosperm View MSA
121310676 5274 Embryophyte View MSA
123348102 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 8.142        
cufflinks 7.322        
cufflinks 0.025     Low Low
cufflinks 2.054        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 8.026        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain