Gene : Medtr2g097620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22763//PTHR22763:SF40 - RING ZINC FINGER PROTEIN Description:  zinc finger, C3HC4 type (RING finger) protein, putative
Genomic Order:  5289 Name:  ? Medtr2g097620
Secondary Identifier:  ? PAC:31064534
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g097620 0.5kb upstream 0.5kb upstream 2369 true chr2: 41696642-41699010 Medicago truncatula
Medtr2g097620 0.5kb upstream 0.5kb upstream 500 false chr2: 41698511-41699010 Medicago truncatula
Medtr2g097620 0.5kb downstream 0.5kb downstream 2369 true chr2: 41696142-41698510 Medicago truncatula
Medtr2g097620 0.5kb downstream 0.5kb downstream 500 false chr2: 41696142-41696641 Medicago truncatula
Medtr2g097620 1.0kb upstream 1.0kb upstream 2869 true chr2: 41696642-41699510 Medicago truncatula
Medtr2g097620 1.0kb upstream 1.0kb upstream 1000 false chr2: 41698511-41699510 Medicago truncatula
Medtr2g097620 1.0kb downstream 1.0kb downstream 2869 true chr2: 41695642-41698510 Medicago truncatula
Medtr2g097620 1.0kb downstream 1.0kb downstream 1000 false chr2: 41695642-41696641 Medicago truncatula
Medtr2g097620 2.0kb upstream 2.0kb upstream 3869 true chr2: 41696642-41700510 Medicago truncatula
Medtr2g097620 2.0kb upstream 2.0kb upstream 2000 false chr2: 41698511-41700510 Medicago truncatula
Medtr2g097620 2.0kb downstream 2.0kb downstream 3869 true chr2: 41694642-41698510 Medicago truncatula
Medtr2g097620 2.0kb downstream 2.0kb downstream 2000 false chr2: 41694642-41696641 Medicago truncatula
Medtr2g097620 5.0kb upstream 5.0kb upstream 6869 true chr2: 41696642-41703510 Medicago truncatula
Medtr2g097620 5.0kb upstream 5.0kb upstream 5000 false chr2: 41698511-41703510 Medicago truncatula
Medtr2g097620 5.0kb downstream 5.0kb downstream 6869 true chr2: 41691642-41698510 Medicago truncatula
Medtr2g097620 5.0kb downstream 5.0kb downstream 5000 false chr2: 41691642-41696641 Medicago truncatula
Medtr2g097620 10.0kb upstream 10.0kb upstream 11869 true chr2: 41696642-41708510 Medicago truncatula
Medtr2g097620 10.0kb upstream 10.0kb upstream 10000 false chr2: 41698511-41708510 Medicago truncatula
Medtr2g097620 10.0kb downstream 10.0kb downstream 11869 true chr2: 41686642-41698510 Medicago truncatula
Medtr2g097620 10.0kb downstream 10.0kb downstream 10000 false chr2: 41686642-41696641 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296211 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 323.885     High High
cufflinks 52.119     High Low
cufflinks 73.201     High  
cufflinks 197.864     High  
cufflinks 64.792     High  
cufflinks 90.161     High  
cufflinks 256.889     High  
cufflinks 47.744     High Low
cufflinks 334.278     High High

0 Strain