Gene : Medtr2g097310 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Description:  GRAS family transcription factor
Genomic Order:  5267 Name:  ? Medtr2g097310
Secondary Identifier:  ? PAC:31065567
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g097310 0.5kb upstream 0.5kb upstream 2482 true chr2: 41555596-41558077 Medicago truncatula
Medtr2g097310 0.5kb upstream 0.5kb upstream 500 false chr2: 41555596-41556095 Medicago truncatula
Medtr2g097310 0.5kb downstream 0.5kb downstream 2482 true chr2: 41556096-41558577 Medicago truncatula
Medtr2g097310 0.5kb downstream 0.5kb downstream 500 false chr2: 41558078-41558577 Medicago truncatula
Medtr2g097310 1.0kb upstream 1.0kb upstream 2982 true chr2: 41555096-41558077 Medicago truncatula
Medtr2g097310 1.0kb upstream 1.0kb upstream 1000 false chr2: 41555096-41556095 Medicago truncatula
Medtr2g097310 1.0kb downstream 1.0kb downstream 2982 true chr2: 41556096-41559077 Medicago truncatula
Medtr2g097310 1.0kb downstream 1.0kb downstream 1000 false chr2: 41558078-41559077 Medicago truncatula
Medtr2g097310 2.0kb upstream 2.0kb upstream 3982 true chr2: 41554096-41558077 Medicago truncatula
Medtr2g097310 2.0kb upstream 2.0kb upstream 2000 false chr2: 41554096-41556095 Medicago truncatula
Medtr2g097310 2.0kb downstream 2.0kb downstream 3982 true chr2: 41556096-41560077 Medicago truncatula
Medtr2g097310 2.0kb downstream 2.0kb downstream 2000 false chr2: 41558078-41560077 Medicago truncatula
Medtr2g097310 5.0kb upstream 5.0kb upstream 6982 true chr2: 41551096-41558077 Medicago truncatula
Medtr2g097310 5.0kb upstream 5.0kb upstream 5000 false chr2: 41551096-41556095 Medicago truncatula
Medtr2g097310 5.0kb downstream 5.0kb downstream 6982 true chr2: 41556096-41563077 Medicago truncatula
Medtr2g097310 5.0kb downstream 5.0kb downstream 5000 false chr2: 41558078-41563077 Medicago truncatula
Medtr2g097310 10.0kb upstream 10.0kb upstream 11982 true chr2: 41546096-41558077 Medicago truncatula
Medtr2g097310 10.0kb upstream 10.0kb upstream 10000 false chr2: 41546096-41556095 Medicago truncatula
Medtr2g097310 10.0kb downstream 10.0kb downstream 11982 true chr2: 41556096-41568077 Medicago truncatula
Medtr2g097310 10.0kb downstream 10.0kb downstream 10000 false chr2: 41558078-41568077 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032262 5273 Angiosperm View MSA
122316746 5265 Fabidae View MSA
124037144 5270 Rosid View MSA
123610216 5271 Pentapetalae View MSA
122644847 5272 Eudicot View MSA
121351918 5274 Embryophyte View MSA
123382411 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.681       High
cufflinks 4.185        
cufflinks 9.158       High
cufflinks 1.123       Low
cufflinks 4.449        
cufflinks 3.688        
cufflinks 2.65        
cufflinks 2.338        
cufflinks 3.132        

0 Strain