Gene : Medtr2g097390 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Description:  GRAS family transcription factor
Genomic Order:  5272 Name:  ? Medtr2g097390
Secondary Identifier:  ? PAC:31062172
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g097390 0.5kb upstream 0.5kb upstream 2557 true chr2: 41588263-41590819 Medicago truncatula
Medtr2g097390 0.5kb upstream 0.5kb upstream 500 false chr2: 41588263-41588762 Medicago truncatula
Medtr2g097390 0.5kb downstream 0.5kb downstream 2557 true chr2: 41588763-41591319 Medicago truncatula
Medtr2g097390 0.5kb downstream 0.5kb downstream 500 false chr2: 41590820-41591319 Medicago truncatula
Medtr2g097390 1.0kb upstream 1.0kb upstream 3057 true chr2: 41587763-41590819 Medicago truncatula
Medtr2g097390 1.0kb upstream 1.0kb upstream 1000 false chr2: 41587763-41588762 Medicago truncatula
Medtr2g097390 1.0kb downstream 1.0kb downstream 3057 true chr2: 41588763-41591819 Medicago truncatula
Medtr2g097390 1.0kb downstream 1.0kb downstream 1000 false chr2: 41590820-41591819 Medicago truncatula
Medtr2g097390 2.0kb upstream 2.0kb upstream 4057 true chr2: 41586763-41590819 Medicago truncatula
Medtr2g097390 2.0kb upstream 2.0kb upstream 2000 false chr2: 41586763-41588762 Medicago truncatula
Medtr2g097390 2.0kb downstream 2.0kb downstream 4057 true chr2: 41588763-41592819 Medicago truncatula
Medtr2g097390 2.0kb downstream 2.0kb downstream 2000 false chr2: 41590820-41592819 Medicago truncatula
Medtr2g097390 5.0kb upstream 5.0kb upstream 7057 true chr2: 41583763-41590819 Medicago truncatula
Medtr2g097390 5.0kb upstream 5.0kb upstream 5000 false chr2: 41583763-41588762 Medicago truncatula
Medtr2g097390 5.0kb downstream 5.0kb downstream 7057 true chr2: 41588763-41595819 Medicago truncatula
Medtr2g097390 5.0kb downstream 5.0kb downstream 5000 false chr2: 41590820-41595819 Medicago truncatula
Medtr2g097390 10.0kb upstream 10.0kb upstream 12057 true chr2: 41578763-41590819 Medicago truncatula
Medtr2g097390 10.0kb upstream 10.0kb upstream 10000 false chr2: 41578763-41588762 Medicago truncatula
Medtr2g097390 10.0kb downstream 10.0kb downstream 12057 true chr2: 41588763-41600819 Medicago truncatula
Medtr2g097390 10.0kb downstream 10.0kb downstream 10000 false chr2: 41590820-41600819 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032262 5273 Angiosperm View MSA
122316746 5265 Fabidae View MSA
124037144 5270 Rosid View MSA
123610216 5271 Pentapetalae View MSA
122644847 5272 Eudicot View MSA
121351918 5274 Embryophyte View MSA
123382411 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.365     High High
cufflinks 8.896        
cufflinks 14.466     High High
cufflinks 1.48       Low
cufflinks 10.195        
cufflinks 2.109       Low
cufflinks 4.487        
cufflinks 5.137        
cufflinks 3.681        

0 Strain