Gene : Medtr3g043750 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11413//PTHR11413:SF50 - CYSTATIN FAMILY MEMBER Description:  cysteine protease inhibitor cystatin
Genomic Order:  1646 Name:  ? Medtr3g043750
Secondary Identifier:  ? PAC:31053296
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g043750 0.5kb upstream 0.5kb upstream 4035 true chr3: 14746764-14750798 Medicago truncatula
Medtr3g043750 0.5kb upstream 0.5kb upstream 500 false chr3: 14746764-14747263 Medicago truncatula
Medtr3g043750 0.5kb downstream 0.5kb downstream 4035 true chr3: 14747264-14751298 Medicago truncatula
Medtr3g043750 0.5kb downstream 0.5kb downstream 500 false chr3: 14750799-14751298 Medicago truncatula
Medtr3g043750 1.0kb upstream 1.0kb upstream 4535 true chr3: 14746264-14750798 Medicago truncatula
Medtr3g043750 1.0kb upstream 1.0kb upstream 1000 false chr3: 14746264-14747263 Medicago truncatula
Medtr3g043750 1.0kb downstream 1.0kb downstream 4535 true chr3: 14747264-14751798 Medicago truncatula
Medtr3g043750 1.0kb downstream 1.0kb downstream 1000 false chr3: 14750799-14751798 Medicago truncatula
Medtr3g043750 2.0kb upstream 2.0kb upstream 5535 true chr3: 14745264-14750798 Medicago truncatula
Medtr3g043750 2.0kb upstream 2.0kb upstream 2000 false chr3: 14745264-14747263 Medicago truncatula
Medtr3g043750 2.0kb downstream 2.0kb downstream 5535 true chr3: 14747264-14752798 Medicago truncatula
Medtr3g043750 2.0kb downstream 2.0kb downstream 2000 false chr3: 14750799-14752798 Medicago truncatula
Medtr3g043750 5.0kb upstream 5.0kb upstream 8535 true chr3: 14742264-14750798 Medicago truncatula
Medtr3g043750 5.0kb upstream 5.0kb upstream 5000 false chr3: 14742264-14747263 Medicago truncatula
Medtr3g043750 5.0kb downstream 5.0kb downstream 8535 true chr3: 14747264-14755798 Medicago truncatula
Medtr3g043750 5.0kb downstream 5.0kb downstream 5000 false chr3: 14750799-14755798 Medicago truncatula
Medtr3g043750 10.0kb upstream 10.0kb upstream 13535 true chr3: 14737264-14750798 Medicago truncatula
Medtr3g043750 10.0kb upstream 10.0kb upstream 10000 false chr3: 14737264-14747263 Medicago truncatula
Medtr3g043750 10.0kb downstream 10.0kb downstream 13535 true chr3: 14747264-14760798 Medicago truncatula
Medtr3g043750 10.0kb downstream 10.0kb downstream 10000 false chr3: 14750799-14760798 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299356 5265 Fabidae View MSA
124064523 5270 Rosid View MSA
123748423 5271 Pentapetalae View MSA
122772609 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.245       Low
cufflinks 14.574     High  
cufflinks 18.709     High High
cufflinks 7.675        
cufflinks 16.445     High  
cufflinks 5.146       Low
cufflinks 6.369        
cufflinks 16.615     High  
cufflinks 11.618     High  

0 Strain