Gene : Medtr3g044820 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22952:SF209 - BZIP TRANSCRIPTION FACTOR Description:  transcription factor HBP-1b(c1) protein, putative
Genomic Order:  1624 Name:  ? Medtr3g044820
Secondary Identifier:  ? PAC:31057192
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g044820 0.5kb upstream 0.5kb upstream 1833 true chr3: 14460848-14462680 Medicago truncatula
Medtr3g044820 0.5kb upstream 0.5kb upstream 500 false chr3: 14460848-14461347 Medicago truncatula
Medtr3g044820 0.5kb downstream 0.5kb downstream 1833 true chr3: 14461348-14463180 Medicago truncatula
Medtr3g044820 0.5kb downstream 0.5kb downstream 500 false chr3: 14462681-14463180 Medicago truncatula
Medtr3g044820 1.0kb upstream 1.0kb upstream 2333 true chr3: 14460348-14462680 Medicago truncatula
Medtr3g044820 1.0kb upstream 1.0kb upstream 1000 false chr3: 14460348-14461347 Medicago truncatula
Medtr3g044820 1.0kb downstream 1.0kb downstream 2333 true chr3: 14461348-14463680 Medicago truncatula
Medtr3g044820 1.0kb downstream 1.0kb downstream 1000 false chr3: 14462681-14463680 Medicago truncatula
Medtr3g044820 2.0kb upstream 2.0kb upstream 3333 true chr3: 14459348-14462680 Medicago truncatula
Medtr3g044820 2.0kb upstream 2.0kb upstream 2000 false chr3: 14459348-14461347 Medicago truncatula
Medtr3g044820 2.0kb downstream 2.0kb downstream 3333 true chr3: 14461348-14464680 Medicago truncatula
Medtr3g044820 2.0kb downstream 2.0kb downstream 2000 false chr3: 14462681-14464680 Medicago truncatula
Medtr3g044820 5.0kb upstream 5.0kb upstream 6333 true chr3: 14456348-14462680 Medicago truncatula
Medtr3g044820 5.0kb upstream 5.0kb upstream 5000 false chr3: 14456348-14461347 Medicago truncatula
Medtr3g044820 5.0kb downstream 5.0kb downstream 6333 true chr3: 14461348-14467680 Medicago truncatula
Medtr3g044820 5.0kb downstream 5.0kb downstream 5000 false chr3: 14462681-14467680 Medicago truncatula
Medtr3g044820 10.0kb upstream 10.0kb upstream 11333 true chr3: 14451348-14462680 Medicago truncatula
Medtr3g044820 10.0kb upstream 10.0kb upstream 10000 false chr3: 14451348-14461347 Medicago truncatula
Medtr3g044820 10.0kb downstream 10.0kb downstream 11333 true chr3: 14461348-14472680 Medicago truncatula
Medtr3g044820 10.0kb downstream 10.0kb downstream 10000 false chr3: 14462681-14472680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027495 5273 Angiosperm View MSA
122287605 5265 Fabidae View MSA
124028090 5270 Rosid View MSA
123746658 5271 Pentapetalae View MSA
122772001 5272 Eudicot View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.027     Low High

0 Strain