Gene : Medtr3g048300 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF04450 - Peptidase of plants and bacteria (BSP) Description:  peptidase
Genomic Order:  1743 Name:  ? Medtr3g048300
Secondary Identifier:  ? PAC:31055986
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g048300 0.5kb upstream 0.5kb upstream 1747 true chr3: 16134704-16136450 Medicago truncatula
Medtr3g048300 0.5kb upstream 0.5kb upstream 500 false chr3: 16134704-16135203 Medicago truncatula
Medtr3g048300 0.5kb downstream 0.5kb downstream 1747 true chr3: 16135204-16136950 Medicago truncatula
Medtr3g048300 0.5kb downstream 0.5kb downstream 500 false chr3: 16136451-16136950 Medicago truncatula
Medtr3g048300 1.0kb upstream 1.0kb upstream 2247 true chr3: 16134204-16136450 Medicago truncatula
Medtr3g048300 1.0kb upstream 1.0kb upstream 1000 false chr3: 16134204-16135203 Medicago truncatula
Medtr3g048300 1.0kb downstream 1.0kb downstream 2247 true chr3: 16135204-16137450 Medicago truncatula
Medtr3g048300 1.0kb downstream 1.0kb downstream 1000 false chr3: 16136451-16137450 Medicago truncatula
Medtr3g048300 2.0kb upstream 2.0kb upstream 3247 true chr3: 16133204-16136450 Medicago truncatula
Medtr3g048300 2.0kb upstream 2.0kb upstream 2000 false chr3: 16133204-16135203 Medicago truncatula
Medtr3g048300 2.0kb downstream 2.0kb downstream 3247 true chr3: 16135204-16138450 Medicago truncatula
Medtr3g048300 2.0kb downstream 2.0kb downstream 2000 false chr3: 16136451-16138450 Medicago truncatula
Medtr3g048300 5.0kb upstream 5.0kb upstream 6247 true chr3: 16130204-16136450 Medicago truncatula
Medtr3g048300 5.0kb upstream 5.0kb upstream 5000 false chr3: 16130204-16135203 Medicago truncatula
Medtr3g048300 5.0kb downstream 5.0kb downstream 6247 true chr3: 16135204-16141450 Medicago truncatula
Medtr3g048300 5.0kb downstream 5.0kb downstream 5000 false chr3: 16136451-16141450 Medicago truncatula
Medtr3g048300 10.0kb upstream 10.0kb upstream 11247 true chr3: 16125204-16136450 Medicago truncatula
Medtr3g048300 10.0kb upstream 10.0kb upstream 10000 false chr3: 16125204-16135203 Medicago truncatula
Medtr3g048300 10.0kb downstream 10.0kb downstream 11247 true chr3: 16135204-16146450 Medicago truncatula
Medtr3g048300 10.0kb downstream 10.0kb downstream 10000 false chr3: 16136451-16146450 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300137 5265 Fabidae View MSA
124065171 5270 Rosid View MSA
123741196 5271 Pentapetalae View MSA
122795014 5272 Eudicot View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.638       Low
cufflinks 2.183        
cufflinks 1.735        
cufflinks 22.534     High High
cufflinks 1.881        
cufflinks 11.854     High  
cufflinks 11.511     High  
cufflinks 1.696        
cufflinks 13.591     High  

0 Strain