Gene : Medtr3g047380 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12526:SF360 - SUCROSE-PHOSPHATE SYNTHASE 3-RELATED Description:  sucrose-phosphate synthase family protein
Genomic Order:  1707 Name:  ? Medtr3g047380
Secondary Identifier:  ? PAC:31060467
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7238 Medicago truncatula pathologic  
Mtruncatula SUCSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g047380 0.5kb upstream 0.5kb upstream 9860 true chr3: 15793366-15803225 Medicago truncatula
Medtr3g047380 0.5kb upstream 0.5kb upstream 500 false chr3: 15793366-15793865 Medicago truncatula
Medtr3g047380 0.5kb downstream 0.5kb downstream 9860 true chr3: 15793866-15803725 Medicago truncatula
Medtr3g047380 0.5kb downstream 0.5kb downstream 500 false chr3: 15803226-15803725 Medicago truncatula
Medtr3g047380 1.0kb upstream 1.0kb upstream 10360 true chr3: 15792866-15803225 Medicago truncatula
Medtr3g047380 1.0kb upstream 1.0kb upstream 1000 false chr3: 15792866-15793865 Medicago truncatula
Medtr3g047380 1.0kb downstream 1.0kb downstream 10360 true chr3: 15793866-15804225 Medicago truncatula
Medtr3g047380 1.0kb downstream 1.0kb downstream 1000 false chr3: 15803226-15804225 Medicago truncatula
Medtr3g047380 2.0kb upstream 2.0kb upstream 11360 true chr3: 15791866-15803225 Medicago truncatula
Medtr3g047380 2.0kb upstream 2.0kb upstream 2000 false chr3: 15791866-15793865 Medicago truncatula
Medtr3g047380 2.0kb downstream 2.0kb downstream 11360 true chr3: 15793866-15805225 Medicago truncatula
Medtr3g047380 2.0kb downstream 2.0kb downstream 2000 false chr3: 15803226-15805225 Medicago truncatula
Medtr3g047380 5.0kb upstream 5.0kb upstream 14360 true chr3: 15788866-15803225 Medicago truncatula
Medtr3g047380 5.0kb upstream 5.0kb upstream 5000 false chr3: 15788866-15793865 Medicago truncatula
Medtr3g047380 5.0kb downstream 5.0kb downstream 14360 true chr3: 15793866-15808225 Medicago truncatula
Medtr3g047380 5.0kb downstream 5.0kb downstream 5000 false chr3: 15803226-15808225 Medicago truncatula
Medtr3g047380 10.0kb upstream 10.0kb upstream 19360 true chr3: 15783866-15803225 Medicago truncatula
Medtr3g047380 10.0kb upstream 10.0kb upstream 10000 false chr3: 15783866-15793865 Medicago truncatula
Medtr3g047380 10.0kb downstream 10.0kb downstream 19360 true chr3: 15793866-15813225 Medicago truncatula
Medtr3g047380 10.0kb downstream 10.0kb downstream 10000 false chr3: 15803226-15813225 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299377 5265 Fabidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low  
cufflinks 0.001     Low Low
cufflinks 0.009     Low  
cufflinks 0.007     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low High
cufflinks 0.004     Low  
cufflinks 0.003     Low  

0 Strain