Gene : Medtr3g052850 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21235:SF2 - IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF Description:  imidazole glycerol phosphate synthase subunit HisF
Genomic Order:  2143 Name:  ? Medtr3g052850
Secondary Identifier:  ? PAC:31054481
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g052850 0.5kb upstream 0.5kb upstream 9821 true chr3: 20938347-20948167 Medicago truncatula
Medtr3g052850 0.5kb upstream 0.5kb upstream 500 false chr3: 20947668-20948167 Medicago truncatula
Medtr3g052850 0.5kb downstream 0.5kb downstream 9821 true chr3: 20937847-20947667 Medicago truncatula
Medtr3g052850 0.5kb downstream 0.5kb downstream 500 false chr3: 20937847-20938346 Medicago truncatula
Medtr3g052850 1.0kb upstream 1.0kb upstream 10321 true chr3: 20938347-20948667 Medicago truncatula
Medtr3g052850 1.0kb upstream 1.0kb upstream 1000 false chr3: 20947668-20948667 Medicago truncatula
Medtr3g052850 1.0kb downstream 1.0kb downstream 10321 true chr3: 20937347-20947667 Medicago truncatula
Medtr3g052850 1.0kb downstream 1.0kb downstream 1000 false chr3: 20937347-20938346 Medicago truncatula
Medtr3g052850 2.0kb upstream 2.0kb upstream 11321 true chr3: 20938347-20949667 Medicago truncatula
Medtr3g052850 2.0kb upstream 2.0kb upstream 2000 false chr3: 20947668-20949667 Medicago truncatula
Medtr3g052850 2.0kb downstream 2.0kb downstream 11321 true chr3: 20936347-20947667 Medicago truncatula
Medtr3g052850 2.0kb downstream 2.0kb downstream 2000 false chr3: 20936347-20938346 Medicago truncatula
Medtr3g052850 5.0kb upstream 5.0kb upstream 14321 true chr3: 20938347-20952667 Medicago truncatula
Medtr3g052850 5.0kb upstream 5.0kb upstream 5000 false chr3: 20947668-20952667 Medicago truncatula
Medtr3g052850 5.0kb downstream 5.0kb downstream 14321 true chr3: 20933347-20947667 Medicago truncatula
Medtr3g052850 5.0kb downstream 5.0kb downstream 5000 false chr3: 20933347-20938346 Medicago truncatula
Medtr3g052850 10.0kb upstream 10.0kb upstream 19321 true chr3: 20938347-20957667 Medicago truncatula
Medtr3g052850 10.0kb upstream 10.0kb upstream 10000 false chr3: 20947668-20957667 Medicago truncatula
Medtr3g052850 10.0kb downstream 10.0kb downstream 19321 true chr3: 20928347-20947667 Medicago truncatula
Medtr3g052850 10.0kb downstream 10.0kb downstream 10000 false chr3: 20928347-20938346 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306975 5265 Fabidae View MSA
124066754 5270 Rosid View MSA
123743623 5271 Pentapetalae View MSA
122792259 5272 Eudicot View MSA
122046043 5273 Angiosperm View MSA
121347063 5274 Embryophyte View MSA
123424776 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.755        
cufflinks 1.007        
cufflinks 1.038        
cufflinks 0.43        
cufflinks 1.591       High
cufflinks 0.217       Low
cufflinks 0.721        
cufflinks 1.064        
cufflinks 0.731        

0 Strain