Gene : Medtr3g052590 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.7.1.130 - Tetraacyldisaccharide 4'-kinase / Lipid-A 4'-kinase Description:  tetraacyldisaccharide 4'-kinase
Genomic Order:  2129 Name:  ? Medtr3g052590
Secondary Identifier:  ? PAC:31054438
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula NAGLIPASYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g052590 0.5kb upstream 0.5kb upstream 4692 true chr3: 20803538-20808229 Medicago truncatula
Medtr3g052590 0.5kb upstream 0.5kb upstream 500 false chr3: 20807730-20808229 Medicago truncatula
Medtr3g052590 0.5kb downstream 0.5kb downstream 4692 true chr3: 20803038-20807729 Medicago truncatula
Medtr3g052590 0.5kb downstream 0.5kb downstream 500 false chr3: 20803038-20803537 Medicago truncatula
Medtr3g052590 1.0kb upstream 1.0kb upstream 5192 true chr3: 20803538-20808729 Medicago truncatula
Medtr3g052590 1.0kb upstream 1.0kb upstream 1000 false chr3: 20807730-20808729 Medicago truncatula
Medtr3g052590 1.0kb downstream 1.0kb downstream 5192 true chr3: 20802538-20807729 Medicago truncatula
Medtr3g052590 1.0kb downstream 1.0kb downstream 1000 false chr3: 20802538-20803537 Medicago truncatula
Medtr3g052590 2.0kb upstream 2.0kb upstream 6192 true chr3: 20803538-20809729 Medicago truncatula
Medtr3g052590 2.0kb upstream 2.0kb upstream 2000 false chr3: 20807730-20809729 Medicago truncatula
Medtr3g052590 2.0kb downstream 2.0kb downstream 6192 true chr3: 20801538-20807729 Medicago truncatula
Medtr3g052590 2.0kb downstream 2.0kb downstream 2000 false chr3: 20801538-20803537 Medicago truncatula
Medtr3g052590 5.0kb upstream 5.0kb upstream 9192 true chr3: 20803538-20812729 Medicago truncatula
Medtr3g052590 5.0kb upstream 5.0kb upstream 5000 false chr3: 20807730-20812729 Medicago truncatula
Medtr3g052590 5.0kb downstream 5.0kb downstream 9192 true chr3: 20798538-20807729 Medicago truncatula
Medtr3g052590 5.0kb downstream 5.0kb downstream 5000 false chr3: 20798538-20803537 Medicago truncatula
Medtr3g052590 10.0kb upstream 10.0kb upstream 14192 true chr3: 20803538-20817729 Medicago truncatula
Medtr3g052590 10.0kb upstream 10.0kb upstream 10000 false chr3: 20807730-20817729 Medicago truncatula
Medtr3g052590 10.0kb downstream 10.0kb downstream 14192 true chr3: 20793538-20807729 Medicago truncatula
Medtr3g052590 10.0kb downstream 10.0kb downstream 10000 false chr3: 20793538-20803537 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040908 5273 Angiosperm View MSA
122304168 5265 Fabidae View MSA
124066187 5270 Rosid View MSA
123740901 5271 Pentapetalae View MSA
122791289 5272 Eudicot View MSA
121346697 5274 Embryophyte View MSA
123380430 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188        
cufflinks 0.605        
cufflinks 0.713        
cufflinks 0.073       Low
cufflinks 0.88        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.315        
cufflinks 0.728        
cufflinks 0.35        

0 Strain