Gene : Medtr3g053170 M. truncatula Mt4.0v1
Defline:  (1 of 6) KOG3036 - Protein involved in cell differentiation/sexual development Description:  cell differentiation RCD1-like protein
Genomic Order:  2164 Name:  ? Medtr3g053170
Secondary Identifier:  ? PAC:31061315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g053170 0.5kb upstream 0.5kb upstream 7936 true chr3: 21103726-21111661 Medicago truncatula
Medtr3g053170 0.5kb upstream 0.5kb upstream 500 false chr3: 21111162-21111661 Medicago truncatula
Medtr3g053170 0.5kb downstream 0.5kb downstream 7936 true chr3: 21103226-21111161 Medicago truncatula
Medtr3g053170 0.5kb downstream 0.5kb downstream 500 false chr3: 21103226-21103725 Medicago truncatula
Medtr3g053170 1.0kb upstream 1.0kb upstream 8436 true chr3: 21103726-21112161 Medicago truncatula
Medtr3g053170 1.0kb upstream 1.0kb upstream 1000 false chr3: 21111162-21112161 Medicago truncatula
Medtr3g053170 1.0kb downstream 1.0kb downstream 8436 true chr3: 21102726-21111161 Medicago truncatula
Medtr3g053170 1.0kb downstream 1.0kb downstream 1000 false chr3: 21102726-21103725 Medicago truncatula
Medtr3g053170 2.0kb upstream 2.0kb upstream 9436 true chr3: 21103726-21113161 Medicago truncatula
Medtr3g053170 2.0kb upstream 2.0kb upstream 2000 false chr3: 21111162-21113161 Medicago truncatula
Medtr3g053170 2.0kb downstream 2.0kb downstream 9436 true chr3: 21101726-21111161 Medicago truncatula
Medtr3g053170 2.0kb downstream 2.0kb downstream 2000 false chr3: 21101726-21103725 Medicago truncatula
Medtr3g053170 5.0kb upstream 5.0kb upstream 12436 true chr3: 21103726-21116161 Medicago truncatula
Medtr3g053170 5.0kb upstream 5.0kb upstream 5000 false chr3: 21111162-21116161 Medicago truncatula
Medtr3g053170 5.0kb downstream 5.0kb downstream 12436 true chr3: 21098726-21111161 Medicago truncatula
Medtr3g053170 5.0kb downstream 5.0kb downstream 5000 false chr3: 21098726-21103725 Medicago truncatula
Medtr3g053170 10.0kb upstream 10.0kb upstream 17436 true chr3: 21103726-21121161 Medicago truncatula
Medtr3g053170 10.0kb upstream 10.0kb upstream 10000 false chr3: 21111162-21121161 Medicago truncatula
Medtr3g053170 10.0kb downstream 10.0kb downstream 17436 true chr3: 21093726-21111161 Medicago truncatula
Medtr3g053170 10.0kb downstream 10.0kb downstream 10000 false chr3: 21093726-21103725 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303523 5265 Fabidae View MSA
124066186 5270 Rosid View MSA
123748122 5271 Pentapetalae View MSA
122792853 5272 Eudicot View MSA
122043480 5273 Angiosperm View MSA
121346204 5274 Embryophyte View MSA
123424774 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.222        
cufflinks 3.023        
cufflinks 2.521        
cufflinks 5.308       High
cufflinks 2.678        
cufflinks 3.93        
cufflinks 3.033        
cufflinks 2.268       Low
cufflinks 4.808       High

0 Strain