Gene : Medtr3g053020 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG2720 - Predicted hydrolase (HIT family) Description:  GDP-L-galactose phosphorylase
Genomic Order:  2156 Name:  ? Medtr3g053020
Secondary Identifier:  ? PAC:31059483
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-882 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g053020 0.5kb upstream 0.5kb upstream 4138 true chr3: 21010501-21014638 Medicago truncatula
Medtr3g053020 0.5kb upstream 0.5kb upstream 500 false chr3: 21014139-21014638 Medicago truncatula
Medtr3g053020 0.5kb downstream 0.5kb downstream 4138 true chr3: 21010001-21014138 Medicago truncatula
Medtr3g053020 0.5kb downstream 0.5kb downstream 500 false chr3: 21010001-21010500 Medicago truncatula
Medtr3g053020 1.0kb upstream 1.0kb upstream 4638 true chr3: 21010501-21015138 Medicago truncatula
Medtr3g053020 1.0kb upstream 1.0kb upstream 1000 false chr3: 21014139-21015138 Medicago truncatula
Medtr3g053020 1.0kb downstream 1.0kb downstream 4638 true chr3: 21009501-21014138 Medicago truncatula
Medtr3g053020 1.0kb downstream 1.0kb downstream 1000 false chr3: 21009501-21010500 Medicago truncatula
Medtr3g053020 2.0kb upstream 2.0kb upstream 5638 true chr3: 21010501-21016138 Medicago truncatula
Medtr3g053020 2.0kb upstream 2.0kb upstream 2000 false chr3: 21014139-21016138 Medicago truncatula
Medtr3g053020 2.0kb downstream 2.0kb downstream 5638 true chr3: 21008501-21014138 Medicago truncatula
Medtr3g053020 2.0kb downstream 2.0kb downstream 2000 false chr3: 21008501-21010500 Medicago truncatula
Medtr3g053020 5.0kb upstream 5.0kb upstream 8638 true chr3: 21010501-21019138 Medicago truncatula
Medtr3g053020 5.0kb upstream 5.0kb upstream 5000 false chr3: 21014139-21019138 Medicago truncatula
Medtr3g053020 5.0kb downstream 5.0kb downstream 8638 true chr3: 21005501-21014138 Medicago truncatula
Medtr3g053020 5.0kb downstream 5.0kb downstream 5000 false chr3: 21005501-21010500 Medicago truncatula
Medtr3g053020 10.0kb upstream 10.0kb upstream 13638 true chr3: 21010501-21024138 Medicago truncatula
Medtr3g053020 10.0kb upstream 10.0kb upstream 10000 false chr3: 21014139-21024138 Medicago truncatula
Medtr3g053020 10.0kb downstream 10.0kb downstream 13638 true chr3: 21000501-21014138 Medicago truncatula
Medtr3g053020 10.0kb downstream 10.0kb downstream 10000 false chr3: 21000501-21010500 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297301 5265 Fabidae View MSA
124071871 5270 Rosid View MSA
123751256 5271 Pentapetalae View MSA
122793442 5272 Eudicot View MSA
122044489 5273 Angiosperm View MSA
121349330 5274 Embryophyte View MSA
123424251 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.076     High  
cufflinks 45.865     High  
cufflinks 58.786     High  
cufflinks 133.336     High High
cufflinks 36.467     High Low
cufflinks 66.537     High  
cufflinks 103.195     High High
cufflinks 46.152     High  
cufflinks 60.005     High  

0 Strain