Gene : Medtr3g054210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00350//PF16880 - Dynamin family (Dynamin_N) // N-terminal EH-domain containing protein (EHD_N) Description:  calcium-binding EF hand protein
Genomic Order:  2215 Name:  ? Medtr3g054210
Secondary Identifier:  ? PAC:31053538
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g054210 0.5kb upstream 0.5kb upstream 5096 true chr3: 21497380-21502475 Medicago truncatula
Medtr3g054210 0.5kb upstream 0.5kb upstream 500 false chr3: 21497380-21497879 Medicago truncatula
Medtr3g054210 0.5kb downstream 0.5kb downstream 5096 true chr3: 21497880-21502975 Medicago truncatula
Medtr3g054210 0.5kb downstream 0.5kb downstream 500 false chr3: 21502476-21502975 Medicago truncatula
Medtr3g054210 1.0kb upstream 1.0kb upstream 5596 true chr3: 21496880-21502475 Medicago truncatula
Medtr3g054210 1.0kb upstream 1.0kb upstream 1000 false chr3: 21496880-21497879 Medicago truncatula
Medtr3g054210 1.0kb downstream 1.0kb downstream 5596 true chr3: 21497880-21503475 Medicago truncatula
Medtr3g054210 1.0kb downstream 1.0kb downstream 1000 false chr3: 21502476-21503475 Medicago truncatula
Medtr3g054210 2.0kb upstream 2.0kb upstream 6596 true chr3: 21495880-21502475 Medicago truncatula
Medtr3g054210 2.0kb upstream 2.0kb upstream 2000 false chr3: 21495880-21497879 Medicago truncatula
Medtr3g054210 2.0kb downstream 2.0kb downstream 6596 true chr3: 21497880-21504475 Medicago truncatula
Medtr3g054210 2.0kb downstream 2.0kb downstream 2000 false chr3: 21502476-21504475 Medicago truncatula
Medtr3g054210 5.0kb upstream 5.0kb upstream 9596 true chr3: 21492880-21502475 Medicago truncatula
Medtr3g054210 5.0kb upstream 5.0kb upstream 5000 false chr3: 21492880-21497879 Medicago truncatula
Medtr3g054210 5.0kb downstream 5.0kb downstream 9596 true chr3: 21497880-21507475 Medicago truncatula
Medtr3g054210 5.0kb downstream 5.0kb downstream 5000 false chr3: 21502476-21507475 Medicago truncatula
Medtr3g054210 10.0kb upstream 10.0kb upstream 14596 true chr3: 21487880-21502475 Medicago truncatula
Medtr3g054210 10.0kb upstream 10.0kb upstream 10000 false chr3: 21487880-21497879 Medicago truncatula
Medtr3g054210 10.0kb downstream 10.0kb downstream 14596 true chr3: 21497880-21512475 Medicago truncatula
Medtr3g054210 10.0kb downstream 10.0kb downstream 10000 false chr3: 21502476-21512475 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316252 5265 Fabidae View MSA
124041851 5270 Rosid View MSA
123743696 5271 Pentapetalae View MSA
122797625 5272 Eudicot View MSA
122047763 5273 Angiosperm View MSA
123428944 5275 Viridiplantae View MSA
121344712 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.799       High
cufflinks 1.009        
cufflinks 0.98        
cufflinks 0.168       Low
cufflinks 1.763       High
cufflinks 0.753        
cufflinks 0.677        
cufflinks 1.039        
cufflinks 0.791        

0 Strain