Gene : Medtr3g053910 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10799:SF70 - CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 Description:  chromodomain helicase DNA-binding protein, putative
Genomic Order:  1787 Name:  ? Medtr3g053910
Secondary Identifier:  ? PAC:31058330
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g053910 0.5kb upstream 0.5kb upstream 23768 true chr3: 16760984-16784751 Medicago truncatula
Medtr3g053910 0.5kb upstream 0.5kb upstream 500 false chr3: 16760984-16761483 Medicago truncatula
Medtr3g053910 0.5kb downstream 0.5kb downstream 23768 true chr3: 16761484-16785251 Medicago truncatula
Medtr3g053910 0.5kb downstream 0.5kb downstream 500 false chr3: 16784752-16785251 Medicago truncatula
Medtr3g053910 1.0kb upstream 1.0kb upstream 24268 true chr3: 16760484-16784751 Medicago truncatula
Medtr3g053910 1.0kb upstream 1.0kb upstream 1000 false chr3: 16760484-16761483 Medicago truncatula
Medtr3g053910 1.0kb downstream 1.0kb downstream 24268 true chr3: 16761484-16785751 Medicago truncatula
Medtr3g053910 1.0kb downstream 1.0kb downstream 1000 false chr3: 16784752-16785751 Medicago truncatula
Medtr3g053910 2.0kb upstream 2.0kb upstream 25268 true chr3: 16759484-16784751 Medicago truncatula
Medtr3g053910 2.0kb upstream 2.0kb upstream 2000 false chr3: 16759484-16761483 Medicago truncatula
Medtr3g053910 2.0kb downstream 2.0kb downstream 25268 true chr3: 16761484-16786751 Medicago truncatula
Medtr3g053910 2.0kb downstream 2.0kb downstream 2000 false chr3: 16784752-16786751 Medicago truncatula
Medtr3g053910 5.0kb upstream 5.0kb upstream 28268 true chr3: 16756484-16784751 Medicago truncatula
Medtr3g053910 5.0kb upstream 5.0kb upstream 5000 false chr3: 16756484-16761483 Medicago truncatula
Medtr3g053910 5.0kb downstream 5.0kb downstream 28268 true chr3: 16761484-16789751 Medicago truncatula
Medtr3g053910 5.0kb downstream 5.0kb downstream 5000 false chr3: 16784752-16789751 Medicago truncatula
Medtr3g053910 10.0kb upstream 10.0kb upstream 33268 true chr3: 16751484-16784751 Medicago truncatula
Medtr3g053910 10.0kb upstream 10.0kb upstream 10000 false chr3: 16751484-16761483 Medicago truncatula
Medtr3g053910 10.0kb downstream 10.0kb downstream 33268 true chr3: 16761484-16794751 Medicago truncatula
Medtr3g053910 10.0kb downstream 10.0kb downstream 10000 false chr3: 16784752-16794751 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299658 5265 Fabidae View MSA
124061763 5270 Rosid View MSA
123752228 5271 Pentapetalae View MSA
122786822 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.461        
cufflinks 0.496        
cufflinks 0.639       High
cufflinks 0.062     Low Low
cufflinks 0.534        
cufflinks 0.089     Low Low
cufflinks 0.188        
cufflinks 0.436        
cufflinks 0.163        

0 Strain