Gene : Medtr3g029510 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11206:SF156 - MATE EFFLUX FAMILY PROTEIN FRD3 Description:  MATE efflux family protein
Genomic Order:  1093 Name:  ? Medtr3g029510
Secondary Identifier:  ? PAC:31059354
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g029510 0.5kb upstream 0.5kb upstream 9102 true chr3: 9271008-9280109 Medicago truncatula
Medtr3g029510 0.5kb upstream 0.5kb upstream 500 false chr3: 9271008-9271507 Medicago truncatula
Medtr3g029510 0.5kb downstream 0.5kb downstream 9102 true chr3: 9271508-9280609 Medicago truncatula
Medtr3g029510 0.5kb downstream 0.5kb downstream 500 false chr3: 9280110-9280609 Medicago truncatula
Medtr3g029510 1.0kb upstream 1.0kb upstream 9602 true chr3: 9270508-9280109 Medicago truncatula
Medtr3g029510 1.0kb upstream 1.0kb upstream 1000 false chr3: 9270508-9271507 Medicago truncatula
Medtr3g029510 1.0kb downstream 1.0kb downstream 9602 true chr3: 9271508-9281109 Medicago truncatula
Medtr3g029510 1.0kb downstream 1.0kb downstream 1000 false chr3: 9280110-9281109 Medicago truncatula
Medtr3g029510 2.0kb upstream 2.0kb upstream 10602 true chr3: 9269508-9280109 Medicago truncatula
Medtr3g029510 2.0kb upstream 2.0kb upstream 2000 false chr3: 9269508-9271507 Medicago truncatula
Medtr3g029510 2.0kb downstream 2.0kb downstream 10602 true chr3: 9271508-9282109 Medicago truncatula
Medtr3g029510 2.0kb downstream 2.0kb downstream 2000 false chr3: 9280110-9282109 Medicago truncatula
Medtr3g029510 5.0kb upstream 5.0kb upstream 13602 true chr3: 9266508-9280109 Medicago truncatula
Medtr3g029510 5.0kb upstream 5.0kb upstream 5000 false chr3: 9266508-9271507 Medicago truncatula
Medtr3g029510 5.0kb downstream 5.0kb downstream 13602 true chr3: 9271508-9285109 Medicago truncatula
Medtr3g029510 5.0kb downstream 5.0kb downstream 5000 false chr3: 9280110-9285109 Medicago truncatula
Medtr3g029510 10.0kb upstream 10.0kb upstream 18602 true chr3: 9261508-9280109 Medicago truncatula
Medtr3g029510 10.0kb upstream 10.0kb upstream 10000 false chr3: 9261508-9271507 Medicago truncatula
Medtr3g029510 10.0kb downstream 10.0kb downstream 18602 true chr3: 9271508-9290109 Medicago truncatula
Medtr3g029510 10.0kb downstream 10.0kb downstream 10000 false chr3: 9280110-9290109 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313903 5265 Fabidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.136        
cufflinks 0.154        
cufflinks 0.088        
cufflinks 0.474        
cufflinks 0.106        
cufflinks 0.17        
cufflinks 0.498        
cufflinks 0.136        
cufflinks 2.118       High

0 Strain