Gene : Medtr3g028140 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  1052 Name:  ? Medtr3g028140
Secondary Identifier:  ? PAC:31059547
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g028140 0.5kb upstream 0.5kb upstream 8403 true chr3: 8902002-8910404 Medicago truncatula
Medtr3g028140 0.5kb upstream 0.5kb upstream 500 false chr3: 8902002-8902501 Medicago truncatula
Medtr3g028140 0.5kb downstream 0.5kb downstream 8403 true chr3: 8902502-8910904 Medicago truncatula
Medtr3g028140 0.5kb downstream 0.5kb downstream 500 false chr3: 8910405-8910904 Medicago truncatula
Medtr3g028140 1.0kb upstream 1.0kb upstream 8903 true chr3: 8901502-8910404 Medicago truncatula
Medtr3g028140 1.0kb upstream 1.0kb upstream 1000 false chr3: 8901502-8902501 Medicago truncatula
Medtr3g028140 1.0kb downstream 1.0kb downstream 8903 true chr3: 8902502-8911404 Medicago truncatula
Medtr3g028140 1.0kb downstream 1.0kb downstream 1000 false chr3: 8910405-8911404 Medicago truncatula
Medtr3g028140 2.0kb upstream 2.0kb upstream 9903 true chr3: 8900502-8910404 Medicago truncatula
Medtr3g028140 2.0kb upstream 2.0kb upstream 2000 false chr3: 8900502-8902501 Medicago truncatula
Medtr3g028140 2.0kb downstream 2.0kb downstream 9903 true chr3: 8902502-8912404 Medicago truncatula
Medtr3g028140 2.0kb downstream 2.0kb downstream 2000 false chr3: 8910405-8912404 Medicago truncatula
Medtr3g028140 5.0kb upstream 5.0kb upstream 12903 true chr3: 8897502-8910404 Medicago truncatula
Medtr3g028140 5.0kb upstream 5.0kb upstream 5000 false chr3: 8897502-8902501 Medicago truncatula
Medtr3g028140 5.0kb downstream 5.0kb downstream 12903 true chr3: 8902502-8915404 Medicago truncatula
Medtr3g028140 5.0kb downstream 5.0kb downstream 5000 false chr3: 8910405-8915404 Medicago truncatula
Medtr3g028140 10.0kb upstream 10.0kb upstream 17903 true chr3: 8892502-8910404 Medicago truncatula
Medtr3g028140 10.0kb upstream 10.0kb upstream 10000 false chr3: 8892502-8902501 Medicago truncatula
Medtr3g028140 10.0kb downstream 10.0kb downstream 17903 true chr3: 8902502-8920404 Medicago truncatula
Medtr3g028140 10.0kb downstream 10.0kb downstream 10000 false chr3: 8910405-8920404 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302784 5265 Fabidae View MSA
124060657 5270 Rosid View MSA
123744402 5271 Pentapetalae View MSA
122787071 5272 Eudicot View MSA
122046161 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121345767 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.78        
cufflinks 2.988        
cufflinks 4.277       High
cufflinks 0.782       Low
cufflinks 3.043        
cufflinks 0.816       Low
cufflinks 2.121        
cufflinks 3.473        
cufflinks 1.522        

0 Strain