Gene : Medtr3g031360 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C 26-RELATED Description:  protein phosphatase 2C family protein
Genomic Order:  2852 Name:  ? Medtr3g031360
Secondary Identifier:  ? PAC:31054465
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g031360 0.5kb upstream 0.5kb upstream 4567 true chr3: 26807100-26811666 Medicago truncatula
Medtr3g031360 0.5kb upstream 0.5kb upstream 500 false chr3: 26807100-26807599 Medicago truncatula
Medtr3g031360 0.5kb downstream 0.5kb downstream 4567 true chr3: 26807600-26812166 Medicago truncatula
Medtr3g031360 0.5kb downstream 0.5kb downstream 500 false chr3: 26811667-26812166 Medicago truncatula
Medtr3g031360 1.0kb upstream 1.0kb upstream 5067 true chr3: 26806600-26811666 Medicago truncatula
Medtr3g031360 1.0kb upstream 1.0kb upstream 1000 false chr3: 26806600-26807599 Medicago truncatula
Medtr3g031360 1.0kb downstream 1.0kb downstream 5067 true chr3: 26807600-26812666 Medicago truncatula
Medtr3g031360 1.0kb downstream 1.0kb downstream 1000 false chr3: 26811667-26812666 Medicago truncatula
Medtr3g031360 2.0kb upstream 2.0kb upstream 6067 true chr3: 26805600-26811666 Medicago truncatula
Medtr3g031360 2.0kb upstream 2.0kb upstream 2000 false chr3: 26805600-26807599 Medicago truncatula
Medtr3g031360 2.0kb downstream 2.0kb downstream 6067 true chr3: 26807600-26813666 Medicago truncatula
Medtr3g031360 2.0kb downstream 2.0kb downstream 2000 false chr3: 26811667-26813666 Medicago truncatula
Medtr3g031360 5.0kb upstream 5.0kb upstream 9067 true chr3: 26802600-26811666 Medicago truncatula
Medtr3g031360 5.0kb upstream 5.0kb upstream 5000 false chr3: 26802600-26807599 Medicago truncatula
Medtr3g031360 5.0kb downstream 5.0kb downstream 9067 true chr3: 26807600-26816666 Medicago truncatula
Medtr3g031360 5.0kb downstream 5.0kb downstream 5000 false chr3: 26811667-26816666 Medicago truncatula
Medtr3g031360 10.0kb upstream 10.0kb upstream 14067 true chr3: 26797600-26811666 Medicago truncatula
Medtr3g031360 10.0kb upstream 10.0kb upstream 10000 false chr3: 26797600-26807599 Medicago truncatula
Medtr3g031360 10.0kb downstream 10.0kb downstream 14067 true chr3: 26807600-26821666 Medicago truncatula
Medtr3g031360 10.0kb downstream 10.0kb downstream 10000 false chr3: 26811667-26821666 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308108 5265 Fabidae View MSA
124067424 5270 Rosid View MSA
123737907 5271 Pentapetalae View MSA
122786654 5272 Eudicot View MSA
122044601 5273 Angiosperm View MSA
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.161        
cufflinks 4.29        
cufflinks 3.705        
cufflinks 0.058     Low Low
cufflinks 7.112       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.143        
cufflinks 3.792        
cufflinks 0.074     Low Low

0 Strain