Gene : Medtr3g030890 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11082:SF29 - TRNA-DIHYDROURIDINE SYNTHASE Description:  tRNA-dihydrouridine synthase
Genomic Order:  1178 Name:  ? Medtr3g030890
Secondary Identifier:  ? PAC:31058760
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g030890 0.5kb upstream 0.5kb upstream 10424 true chr3: 9802443-9812866 Medicago truncatula
Medtr3g030890 0.5kb upstream 0.5kb upstream 500 false chr3: 9812367-9812866 Medicago truncatula
Medtr3g030890 0.5kb downstream 0.5kb downstream 10424 true chr3: 9801943-9812366 Medicago truncatula
Medtr3g030890 0.5kb downstream 0.5kb downstream 500 false chr3: 9801943-9802442 Medicago truncatula
Medtr3g030890 1.0kb upstream 1.0kb upstream 10924 true chr3: 9802443-9813366 Medicago truncatula
Medtr3g030890 1.0kb upstream 1.0kb upstream 1000 false chr3: 9812367-9813366 Medicago truncatula
Medtr3g030890 1.0kb downstream 1.0kb downstream 10924 true chr3: 9801443-9812366 Medicago truncatula
Medtr3g030890 1.0kb downstream 1.0kb downstream 1000 false chr3: 9801443-9802442 Medicago truncatula
Medtr3g030890 2.0kb upstream 2.0kb upstream 11924 true chr3: 9802443-9814366 Medicago truncatula
Medtr3g030890 2.0kb upstream 2.0kb upstream 2000 false chr3: 9812367-9814366 Medicago truncatula
Medtr3g030890 2.0kb downstream 2.0kb downstream 11924 true chr3: 9800443-9812366 Medicago truncatula
Medtr3g030890 2.0kb downstream 2.0kb downstream 2000 false chr3: 9800443-9802442 Medicago truncatula
Medtr3g030890 5.0kb upstream 5.0kb upstream 14924 true chr3: 9802443-9817366 Medicago truncatula
Medtr3g030890 5.0kb upstream 5.0kb upstream 5000 false chr3: 9812367-9817366 Medicago truncatula
Medtr3g030890 5.0kb downstream 5.0kb downstream 14924 true chr3: 9797443-9812366 Medicago truncatula
Medtr3g030890 5.0kb downstream 5.0kb downstream 5000 false chr3: 9797443-9802442 Medicago truncatula
Medtr3g030890 10.0kb upstream 10.0kb upstream 19924 true chr3: 9802443-9822366 Medicago truncatula
Medtr3g030890 10.0kb upstream 10.0kb upstream 10000 false chr3: 9812367-9822366 Medicago truncatula
Medtr3g030890 10.0kb downstream 10.0kb downstream 19924 true chr3: 9792443-9812366 Medicago truncatula
Medtr3g030890 10.0kb downstream 10.0kb downstream 10000 false chr3: 9792443-9802442 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313193 5265 Fabidae View MSA
124063739 5270 Rosid View MSA
123742826 5271 Pentapetalae View MSA
122786306 5272 Eudicot View MSA
122042083 5273 Angiosperm View MSA
121347615 5274 Embryophyte View MSA
123428841 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.285        
cufflinks 0.421        
cufflinks 0.541        
cufflinks 0.124       Low
cufflinks 0.663       High
cufflinks 0.065     Low Low
cufflinks 0.477        
cufflinks 0.431        
cufflinks 0.301        

0 Strain