Gene : Medtr3g032530 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10108//PTHR10108:SF908 - METHYLTRANSFERASE Description:  S-adenosyl-methionine-sterol-C-methyltransferase
Genomic Order:  1224 Name:  ? Medtr3g032530
Secondary Identifier:  ? PAC:31059294
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-2541 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g032530 0.5kb upstream 0.5kb upstream 8025 true chr3: 10271423-10279447 Medicago truncatula
Medtr3g032530 0.5kb upstream 0.5kb upstream 500 false chr3: 10278948-10279447 Medicago truncatula
Medtr3g032530 0.5kb downstream 0.5kb downstream 8025 true chr3: 10270923-10278947 Medicago truncatula
Medtr3g032530 0.5kb downstream 0.5kb downstream 500 false chr3: 10270923-10271422 Medicago truncatula
Medtr3g032530 1.0kb upstream 1.0kb upstream 8525 true chr3: 10271423-10279947 Medicago truncatula
Medtr3g032530 1.0kb upstream 1.0kb upstream 1000 false chr3: 10278948-10279947 Medicago truncatula
Medtr3g032530 1.0kb downstream 1.0kb downstream 8525 true chr3: 10270423-10278947 Medicago truncatula
Medtr3g032530 1.0kb downstream 1.0kb downstream 1000 false chr3: 10270423-10271422 Medicago truncatula
Medtr3g032530 2.0kb upstream 2.0kb upstream 9525 true chr3: 10271423-10280947 Medicago truncatula
Medtr3g032530 2.0kb upstream 2.0kb upstream 2000 false chr3: 10278948-10280947 Medicago truncatula
Medtr3g032530 2.0kb downstream 2.0kb downstream 9525 true chr3: 10269423-10278947 Medicago truncatula
Medtr3g032530 2.0kb downstream 2.0kb downstream 2000 false chr3: 10269423-10271422 Medicago truncatula
Medtr3g032530 5.0kb upstream 5.0kb upstream 12525 true chr3: 10271423-10283947 Medicago truncatula
Medtr3g032530 5.0kb upstream 5.0kb upstream 5000 false chr3: 10278948-10283947 Medicago truncatula
Medtr3g032530 5.0kb downstream 5.0kb downstream 12525 true chr3: 10266423-10278947 Medicago truncatula
Medtr3g032530 5.0kb downstream 5.0kb downstream 5000 false chr3: 10266423-10271422 Medicago truncatula
Medtr3g032530 10.0kb upstream 10.0kb upstream 17525 true chr3: 10271423-10288947 Medicago truncatula
Medtr3g032530 10.0kb upstream 10.0kb upstream 10000 false chr3: 10278948-10288947 Medicago truncatula
Medtr3g032530 10.0kb downstream 10.0kb downstream 17525 true chr3: 10261423-10278947 Medicago truncatula
Medtr3g032530 10.0kb downstream 10.0kb downstream 10000 false chr3: 10261423-10271422 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
122305838 5265 Fabidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.811       Low
cufflinks 3.906        
cufflinks 4.988       High
cufflinks 2.319        
cufflinks 5.088       High
cufflinks 2.353        
cufflinks 1.918        
cufflinks 3.328        
cufflinks 1.983        

0 Strain