Gene : Medtr3g033470 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Description:  structural maintenance-like chromosomes-protein
Genomic Order:  1266 Name:  ? Medtr3g033470
Secondary Identifier:  ? PAC:31055948
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g033470 0.5kb upstream 0.5kb upstream 17665 true chr3: 10689387-10707051 Medicago truncatula
Medtr3g033470 0.5kb upstream 0.5kb upstream 500 false chr3: 10689387-10689886 Medicago truncatula
Medtr3g033470 0.5kb downstream 0.5kb downstream 17665 true chr3: 10689887-10707551 Medicago truncatula
Medtr3g033470 0.5kb downstream 0.5kb downstream 500 false chr3: 10707052-10707551 Medicago truncatula
Medtr3g033470 1.0kb upstream 1.0kb upstream 18165 true chr3: 10688887-10707051 Medicago truncatula
Medtr3g033470 1.0kb upstream 1.0kb upstream 1000 false chr3: 10688887-10689886 Medicago truncatula
Medtr3g033470 1.0kb downstream 1.0kb downstream 18165 true chr3: 10689887-10708051 Medicago truncatula
Medtr3g033470 1.0kb downstream 1.0kb downstream 1000 false chr3: 10707052-10708051 Medicago truncatula
Medtr3g033470 2.0kb upstream 2.0kb upstream 19165 true chr3: 10687887-10707051 Medicago truncatula
Medtr3g033470 2.0kb upstream 2.0kb upstream 2000 false chr3: 10687887-10689886 Medicago truncatula
Medtr3g033470 2.0kb downstream 2.0kb downstream 19165 true chr3: 10689887-10709051 Medicago truncatula
Medtr3g033470 2.0kb downstream 2.0kb downstream 2000 false chr3: 10707052-10709051 Medicago truncatula
Medtr3g033470 5.0kb upstream 5.0kb upstream 22165 true chr3: 10684887-10707051 Medicago truncatula
Medtr3g033470 5.0kb upstream 5.0kb upstream 5000 false chr3: 10684887-10689886 Medicago truncatula
Medtr3g033470 5.0kb downstream 5.0kb downstream 22165 true chr3: 10689887-10712051 Medicago truncatula
Medtr3g033470 5.0kb downstream 5.0kb downstream 5000 false chr3: 10707052-10712051 Medicago truncatula
Medtr3g033470 10.0kb upstream 10.0kb upstream 27165 true chr3: 10679887-10707051 Medicago truncatula
Medtr3g033470 10.0kb upstream 10.0kb upstream 10000 false chr3: 10679887-10689886 Medicago truncatula
Medtr3g033470 10.0kb downstream 10.0kb downstream 27165 true chr3: 10689887-10717051 Medicago truncatula
Medtr3g033470 10.0kb downstream 10.0kb downstream 10000 false chr3: 10707052-10717051 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301924 5265 Fabidae View MSA
124065348 5270 Rosid View MSA
123736538 5271 Pentapetalae View MSA
122789208 5272 Eudicot View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.171        
cufflinks 0.336       High
cufflinks 0.279        
cufflinks 0.097       Low
cufflinks 0.286        
cufflinks 0.051     Low Low
cufflinks 0.205        
cufflinks 0.242        
cufflinks 0.179        

0 Strain