Gene : Medtr3g035680 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR23321:SF31 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Description:  ribulose bisphosphate carboxylase large chain
Genomic Order:  1497 Name:  ? Medtr3g035680
Secondary Identifier:  ? PAC:31060976
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CALVIN-PWY Medicago truncatula pathologic  
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5723 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g035680 0.5kb upstream 0.5kb upstream 1114 true chr3: 13231856-13232969 Medicago truncatula
Medtr3g035680 0.5kb upstream 0.5kb upstream 500 false chr3: 13231856-13232355 Medicago truncatula
Medtr3g035680 0.5kb downstream 0.5kb downstream 1114 true chr3: 13232356-13233469 Medicago truncatula
Medtr3g035680 0.5kb downstream 0.5kb downstream 500 false chr3: 13232970-13233469 Medicago truncatula
Medtr3g035680 1.0kb upstream 1.0kb upstream 1614 true chr3: 13231356-13232969 Medicago truncatula
Medtr3g035680 1.0kb upstream 1.0kb upstream 1000 false chr3: 13231356-13232355 Medicago truncatula
Medtr3g035680 1.0kb downstream 1.0kb downstream 1614 true chr3: 13232356-13233969 Medicago truncatula
Medtr3g035680 1.0kb downstream 1.0kb downstream 1000 false chr3: 13232970-13233969 Medicago truncatula
Medtr3g035680 2.0kb upstream 2.0kb upstream 2614 true chr3: 13230356-13232969 Medicago truncatula
Medtr3g035680 2.0kb upstream 2.0kb upstream 2000 false chr3: 13230356-13232355 Medicago truncatula
Medtr3g035680 2.0kb downstream 2.0kb downstream 2614 true chr3: 13232356-13234969 Medicago truncatula
Medtr3g035680 2.0kb downstream 2.0kb downstream 2000 false chr3: 13232970-13234969 Medicago truncatula
Medtr3g035680 5.0kb upstream 5.0kb upstream 5614 true chr3: 13227356-13232969 Medicago truncatula
Medtr3g035680 5.0kb upstream 5.0kb upstream 5000 false chr3: 13227356-13232355 Medicago truncatula
Medtr3g035680 5.0kb downstream 5.0kb downstream 5614 true chr3: 13232356-13237969 Medicago truncatula
Medtr3g035680 5.0kb downstream 5.0kb downstream 5000 false chr3: 13232970-13237969 Medicago truncatula
Medtr3g035680 10.0kb upstream 10.0kb upstream 10614 true chr3: 13222356-13232969 Medicago truncatula
Medtr3g035680 10.0kb upstream 10.0kb upstream 10000 false chr3: 13222356-13232355 Medicago truncatula
Medtr3g035680 10.0kb downstream 10.0kb downstream 10614 true chr3: 13232356-13242969 Medicago truncatula
Medtr3g035680 10.0kb downstream 10.0kb downstream 10000 false chr3: 13232970-13242969 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298228 5265 Fabidae View MSA
124074092 5270 Rosid View MSA
123751375 5271 Pentapetalae View MSA
122794662 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low Low
cufflinks 0.466        
cufflinks 0.734        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.528        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.724        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain