Gene : Medtr3g036100 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR13878:SF53 - CYTOKININ DEHYDROGENASE 6 Description:  cytokinin oxidase/dehydrogenase-like protein
Genomic Order:  1520 Name:  ? Medtr3g036100
Secondary Identifier:  ? PAC:31056035
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g036100 0.5kb upstream 0.5kb upstream 4953 true chr3: 13411900-13416852 Medicago truncatula
Medtr3g036100 0.5kb upstream 0.5kb upstream 500 false chr3: 13416353-13416852 Medicago truncatula
Medtr3g036100 0.5kb downstream 0.5kb downstream 4953 true chr3: 13411400-13416352 Medicago truncatula
Medtr3g036100 0.5kb downstream 0.5kb downstream 500 false chr3: 13411400-13411899 Medicago truncatula
Medtr3g036100 1.0kb upstream 1.0kb upstream 5453 true chr3: 13411900-13417352 Medicago truncatula
Medtr3g036100 1.0kb upstream 1.0kb upstream 1000 false chr3: 13416353-13417352 Medicago truncatula
Medtr3g036100 1.0kb downstream 1.0kb downstream 5453 true chr3: 13410900-13416352 Medicago truncatula
Medtr3g036100 1.0kb downstream 1.0kb downstream 1000 false chr3: 13410900-13411899 Medicago truncatula
Medtr3g036100 2.0kb upstream 2.0kb upstream 6453 true chr3: 13411900-13418352 Medicago truncatula
Medtr3g036100 2.0kb upstream 2.0kb upstream 2000 false chr3: 13416353-13418352 Medicago truncatula
Medtr3g036100 2.0kb downstream 2.0kb downstream 6453 true chr3: 13409900-13416352 Medicago truncatula
Medtr3g036100 2.0kb downstream 2.0kb downstream 2000 false chr3: 13409900-13411899 Medicago truncatula
Medtr3g036100 5.0kb upstream 5.0kb upstream 9453 true chr3: 13411900-13421352 Medicago truncatula
Medtr3g036100 5.0kb upstream 5.0kb upstream 5000 false chr3: 13416353-13421352 Medicago truncatula
Medtr3g036100 5.0kb downstream 5.0kb downstream 9453 true chr3: 13406900-13416352 Medicago truncatula
Medtr3g036100 5.0kb downstream 5.0kb downstream 5000 false chr3: 13406900-13411899 Medicago truncatula
Medtr3g036100 10.0kb upstream 10.0kb upstream 14453 true chr3: 13411900-13426352 Medicago truncatula
Medtr3g036100 10.0kb upstream 10.0kb upstream 10000 false chr3: 13416353-13426352 Medicago truncatula
Medtr3g036100 10.0kb downstream 10.0kb downstream 14453 true chr3: 13401900-13416352 Medicago truncatula
Medtr3g036100 10.0kb downstream 10.0kb downstream 10000 false chr3: 13401900-13411899 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297373 5265 Fabidae View MSA
124067544 5270 Rosid View MSA
123739719 5271 Pentapetalae View MSA
122789559 5272 Eudicot View MSA
122043660 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 0.067     Low  
cufflinks 0.03     Low  
cufflinks 2.694       High
cufflinks 0.072        
cufflinks 0.544        
cufflinks 0.964        
cufflinks 0.088        
cufflinks 0.539        

0 Strain